Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2072 ATGACTCCTGTTGCTATGAACCCTCCAAACCCTTTCCTTCTCACGGATCAAATAGAAGATCAACACCAACTCTTCGTTTCTCCTCTTAATCAGGATTCTTCATCATCTAATCTTTCTCTCTCTTCACGTCCTACTTTCTTCCACTTACTTGATCAAACTCAGACTGCTAGAGAAAACAGCCGAGAGTTAAGACATGATCAAGAGGAAGATGGACTGGTGTTTCATGGTGGATCAAGCAGGCATGACCAAGTTTGTAATTCATCCGTCAATTCACCCCACCAGACTCAACAAAGTAAGGATGATCGAAGAAACGTGTGTGGCGGATATAAAGTAGAGGAGGAAGAAGAAAGCCATAAAAGCAGTTACGAGACTGTAAAATGGATGCCTTCAAAGATGAGGTTGATGAAGAAGATGATGATCCCCAATAATACCAGTCCGGTCCCTGACAAAGGATCAAATATCACTCTAAATATCCAAACTCGAGAGAACCACAAAACCCAAACCCAAAAAAGCCCTTCCAATAACCACAGAAATAACACCACCACTAGGGTTTGCGCCGACTGTAACACAACCAGTACCCCACTTTGGAGGGGTGGCCCAAAGGGTCCTAAGTCATTGTGCAATGCGTGTGGGATTAGGCAGAGGAAGGCGAGAAGGGCATTAATGGCGGAAGCTGGAAATGGTGCAGTGAGTTGCAGATTGAATAGCAAGGAGAAGAAGGCTCGCACGAACCATTTTGTAGCATTAAAGAATAATAATAAGTGCAAGGCCACTATTGCAAGCCATAGTGAAGGAACGTTATCTGAGGGAGAAAGGACCAAGAAGAAAAATGTTGGGTTTAAGGATTTGGCATTTAGTTTCAGGAACAATGTGTCGGTGGTTGAACAAGTGTTTCCTCCGGCCGATGAAGTTGCTCAAGCGGCGTTGCTTCTCATGGATTTATCTTATGCATCTGTTCCTATTTAA 966 0.4369 MTPVAMNPPNPFLLTDQIEDQHQLFVSPLNQDSSSSNLSLSSRPTFFHLLDQTQTARENSRELRHDQEEDGLVFHGGSSRHDQVCNSSVNSPHQTQQSKDDRRNVCGGYKVEEEEESHKSSYETVKWMPSKMRLMKKMMIPNNTSPVPDKGSNITLNIQTRENHKTQTQKSPSNNHRNNTTTRVCADCNTTSTPLWRGGPKGPKSLCNACGIRQRKARRALMAEAGNGAVSCRLNSKEKKARTNHFVALKNNNKCKATIASHSEGTLSEGERTKKKNVGFKDLAFSFRNNVSVVEQVFPPADEVAQAALLLMDLSYASVPI 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2072 321 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 1 317 - -
Acco05g2072 321 CDD ZnF_GATA 184 216 IPR000679 GO:0006355|GO:0043565
Acco05g2072 321 SMART GATA_3 179 231 IPR000679 GO:0006355|GO:0043565
Acco05g2072 321 Pfam GATA zinc finger 185 218 IPR000679 GO:0006355|GO:0043565
Acco05g2072 321 ProSiteProfiles GATA-type zinc finger domain profile. 179 215 IPR000679 GO:0006355|GO:0043565
Acco05g2072 321 ProSitePatterns GATA-type zinc finger domain. 185 210 IPR000679 GO:0006355|GO:0043565
Acco05g2072 321 MobiDBLite consensus disorder prediction 72 104 - -
Acco05g2072 321 MobiDBLite consensus disorder prediction 80 95 - -
Acco05g2072 321 Gene3D - 177 275 IPR013088 GO:0006355|GO:0008270
Acco05g2072 321 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 178 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2072 Acco-ChrAcco05 37026559 37028225 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2072 124 319 C2C2-Gata Transcription Factor Family AT4G26150 40.278 3.14e-23 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Acco05g2072 GATA 7.2e-16 CL0167