Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2065 ATGGGAAGGAAATGCTCGTATTGTGGAAACCTTGGACACAATTCAAGGACTTGCAATATTATTGAGAGAAGAGGTGCATTCGATAATGGTGGCCTCAAGATCTTTGGAGTACAATTCATTGATCCCCCTCCTCCTCCTCCTCCTCCTCCTCTTCCTTCACCTATTAATCACAGTCATGACATCCAAAGAAGTTTCAGCTTTGACTGCTTACTGCCCTCTCCCCAGAACACCCTCGTATCAACAACCACGTCTTCCTCTTCCTCTTACGATGACAATTCATATCACAAAGCGTCTGATTCTAATTTAGCCCCCAGAACCCAAGAAAGGAATAATAAAGGAGTGGCATGGACGGAGGAGGAGCACCGGACATTTCTGATGGGGCTGAAGAAGCTGGGGAAGGGTGATTGGAGAGGCATCTCTAAGAATTATGTGACCACAAGAACACCAACCCAAGTGGCCAGTCATGCCCAGAAATTTTTCCTCCGTCAGAATCATCACGCCAATAAAAGAAAGCGTTATCAAACCCTCCTTCATGATGTGGAGGGACAAAATAATTACTCAATTGAACCAGTAAAAAATTATTCTTGCTTTAATAAGCCCACTTCTACTGAAGCTCTTGGTGCTTCTGAGACTATGAACATGGATGTCAGTTGCAGCGGCCACACCAATGGCAAAAGGATTTGTCTCTCTCAGTGGCTTTCAAGATATCATTCAATGCTGAATTTTTCTGCCTCTTCACCAAAGTGCGCTCTTCACTGCTTAGAACCTGATTTAGAACTCAGACTGGCGGCGGCTCCGAGCTTTCATTAA 810 0.4469 MGRKCSYCGNLGHNSRTCNIIERRGAFDNGGLKIFGVQFIDPPPPPPPPPLPSPINHSHDIQRSFSFDCLLPSPQNTLVSTTTSSSSSYDDNSYHKASDSNLAPRTQERNNKGVAWTEEEHRTFLMGLKKLGKGDWRGISKNYVTTRTPTQVASHAQKFFLRQNHHANKRKRYQTLLHDVEGQNNYSIEPVKNYSCFNKPTSTEALGASETMNMDVSCSGHTNGKRICLSQWLSRYHSMLNFSASSPKCALHCLEPDLELRLAAAPSFH 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2065 269 SMART sant 112 162 IPR001005 -
Acco05g2065 269 ProSiteProfiles Myb-like domain profile. 108 160 IPR001005 -
Acco05g2065 269 PANTHER TRANSCRIPTION FACTOR KUA1 3 202 - -
Acco05g2065 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 164 IPR017930 -
Acco05g2065 269 CDD SANT 115 160 IPR001005 -
Acco05g2065 269 Gene3D - 114 165 - -
Acco05g2065 269 FunFam transcription factor MYB1R1 114 165 - -
Acco05g2065 269 MobiDBLite consensus disorder prediction 78 111 - -
Acco05g2065 269 Pfam Myb-like DNA-binding domain 115 158 IPR001005 -
Acco05g2065 269 MobiDBLite consensus disorder prediction 78 115 - -
Acco05g2065 269 ProSiteProfiles SANT domain profile. 116 164 IPR017884 -
Acco05g2065 269 SUPERFAMILY Homeodomain-like 111 165 IPR009057 -
Acco05g2065 269 NCBIfam myb-like DNA-binding domain, SHAQKYF class 111 163 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2065 Acco-ChrAcco05 36977811 36978836 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco05g2065 Myb_DNA-binding 6.5e-11 CL0123