Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2063 ATGGAGAATGATATGTTTGGTGCTCCAATGGACGTGGATGCTGGCCGAAATTCCCCCGTCTTAGATGAAATTTCACAAACAGCAAATCCACTTGTTCAGGGCTATTCATCCGACCAAACACGCATGATGAATGGAATCTCAATGCTTGCTGGAATGCAAGGTGAACTCATAAGTAATGTCCATTTCGATGTTCCTCCATTGAATCCTGCCTGCGTTGCTGATCCTAGTTCCTTGGTTCCATCTCAAGTAAAGAACATTTTAGGAGATGCCCCGGTTGCAACCCCGTGTCCCCGAAACAATAGTGTGTTTCATGATCAACAAGCAGGAGCCAGTAAAATCACTCCTGCTTCACTTTCTGTCACTTCTGCTGCAAGATTTGGTCTTCAAGAAGACTTGGAGAAATCATCAGCTCTGTCTGCTTCACCCTGTTCATTGGAGGCTCTGGCACCTTTTATATTAAGCAATTGGCAGGATAGTTCAAACACTCTGCTTCCAACTTTTGGAGATCGTGTGTATGATGAAGTACCTGGTACTAGGTTCTTATCTTATTCGTCCACATCAAACCCGGATCTAAATGGATGGACATCTTCAAATGCTGCAAACTTGACCCATCATGGTTATGATTACCCGAGTTTCAGGAATGAGCTTTCATTAAGTCTTGCAACTTCTCCCGCCAAAGGTCGGTACTCGGAGGTGATTTCTGATAGCTTGGAACAAGCCTCCTGTAGCAGTAGGGGAGATTCCGGAAGTTTGGGTTCCAATAGACATTTCAATTTTTCACTAGCAATATTGGGGTCCAGATATCTTACTGGGATTCAAGAAATACTTGCTCAAATTGCAAGGTGTTCACTTGAAAATACAGAACAGGTTAATTGTTCAGCTGCTAGGAGTAGAGCCAGAGCAGAAGGGAATATATCAACCTCAGTTCTTCCATCCGGGAGAATGATAGAGACAACAAATCACAATGCAGATTCTATGTTTGAAGCTCAAGTGAATTCTTCATTTGCTACACATGATGCTTCTGAATCAAAGAAATCCCAGCTTCTGTCACTTTTACAACTGGTGGACAATCGATATAATCAGTGTTTGGATGAGATACATACTGTTGTATCCGCATTTCATGCTGCTACGGAGTTGGACCCGCAAGTTCATGCACATTTTGCTCTTGAGACAATCTCTTTGCTGTACAAGGATTTGCGTGAGAGGATAAGCAATTATATCCTTTCCATGGGAGAAATATTTAACAACTCACGCTCAGAAGAAGATAAGGAAAGGTCTACGGAAGCCTTATTCATCGAAAAAGAATGGGCTCTGCAGCAATTCAAGAGAAAAGAGCATCAGTTATGGAGACCCCAAAGGGGCTTGCCAGAACGATCCGTCTCTGTTCTTCGGGTTTGGATGTTTCAGAATTTCCTCCATCCGTATCCAAAAGATGCAGAGAAGCAACTACTTGCAGTAAAAAGTGGATTGACTAGAAGCCAGGTATCAAACTGGTTCACTAATGCTCGTGTAAGGCTGTGGAAACCTTTGATTGAGGAAATGTACGTTGAAATGAACAGAAGGAAGGCTCTTAGGAATGAAGAAGGCACGCAGAGCAGCCACAGAAGCAGCGGGGTACGCTTGAGCAATCAAAGATTTGCTATCAATTCATAA 1653 0.4301 MENDMFGAPMDVDAGRNSPVLDEISQTANPLVQGYSSDQTRMMNGISMLAGMQGELISNVHFDVPPLNPACVADPSSLVPSQVKNILGDAPVATPCPRNNSVFHDQQAGASKITPASLSVTSAARFGLQEDLEKSSALSASPCSLEALAPFILSNWQDSSNTLLPTFGDRVYDEVPGTRFLSYSSTSNPDLNGWTSSNAANLTHHGYDYPSFRNELSLSLATSPAKGRYSEVISDSLEQASCSSRGDSGSLGSNRHFNFSLAILGSRYLTGIQEILAQIARCSLENTEQVNCSAARSRARAEGNISTSVLPSGRMIETTNHNADSMFEAQVNSSFATHDASESKKSQLLSLLQLVDNRYNQCLDEIHTVVSAFHAATELDPQVHAHFALETISLLYKDLRERISNYILSMGEIFNNSRSEEDKERSTEALFIEKEWALQQFKRKEHQLWRPQRGLPERSVSVLRVWMFQNFLHPYPKDAEKQLLAVKSGLTRSQVSNWFTNARVRLWKPLIEEMYVEMNRRKALRNEEGTQSSHRSSGVRLSNQRFAINS 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2063 550 SMART prehox3 257 405 IPR006563 -
Acco05g2063 550 Pfam Homeobox KN domain 466 505 IPR008422 GO:0003677|GO:0006355
Acco05g2063 550 SMART HOX_1 449 513 IPR001356 GO:0003677
Acco05g2063 550 Pfam Associated with HOX 263 404 IPR006563 -
Acco05g2063 550 Gene3D - 452 531 - -
Acco05g2063 550 CDD homeodomain 449 509 IPR001356 GO:0003677
Acco05g2063 550 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 194 530 - -
Acco05g2063 550 SUPERFAMILY Homeodomain-like 451 517 IPR009057 -
Acco05g2063 550 ProSiteProfiles 'Homeobox' domain profile. 468 509 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2063 Acco-ChrAcco05 36950037 36951986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2063 214 522 Homeobox Transcription Factor Family AT4G32980 53.943 2.59e-99 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Acco05g2063 POX 1.2e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2063 05 36950037 36951986 Acco05g2063 05 36950037 36951986 ECH