Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2049 ATGGGAAGAGCTCCTTGCTGTGATAAAGCCAGCGTTAAGAGAGGCCCTTGGTCTCCTGAAGAAGACGATACTCTCAGGACTTATGTTCAAACTCATGGCACTGGTGGTAATTGGATTGCATTGCCCCGTAAAGCAGGCCTTCGGAGGTGTGGCAAGAGTTGCCGTCTACGGTGGCTGAATTATCTCAGGCCAGACATCAAACATGGAGGCTTTACTGACGAAGAAGACAACATCATTTTGAGCCTTTACGGCCAAATGGGAAGCAGATGGTCGGCCATAGCCTCTCGGCTTCCTGGTAGAACAGACAATGATGTGAAAAACTACTGGAACACCAAGTTAAAGAAGAAGCTAATGTCAGGAAAAGTGAACCTCAAAACACTCTCTGACGACACTCACACTACTACCAGTCTTCCTTCGACCACATCATCACTAACTCATAATGTTCAAACCCAAAACCAAAATCCAGATTTTGCTCCTTCCCAAATAAACCACACTTCATCTTCCTCACCAACTCTACAAATTCCGACCGACGCCAATTCTGGGGGGTTTCACCACCACATTAACACTCACAACACCATGATCAGTTTTGACCCGTCTCAATTATACAGTCCAGGGTTCATGGATGTCTCAGAAATCAACGCAAGCTCCAGCATGATCTCGCCCTTGTCTCAGGAAGGTTCAAGCATTTCGGATTCATCTTTGATGGCAACAGAGAACAAATTATGTGTGTCGCTGCCCGATCATGCTGGGGACGAAACAACCCAGGTGTTGATGAATTTTGGGTTTGGTGGTTATTACTCTGACCTTGTCAATAATGGCTTTTACTCCCATGGGAAAATTGGTGAGTTCGCTTCAATATTCTATCCTCATGAGTTGGTTGATTTTGGCTATAATGCTGACATGAAGCCACAAGGACGAAATTAA 924 0.4524 MGRAPCCDKASVKRGPWSPEEDDTLRTYVQTHGTGGNWIALPRKAGLRRCGKSCRLRWLNYLRPDIKHGGFTDEEDNIILSLYGQMGSRWSAIASRLPGRTDNDVKNYWNTKLKKKLMSGKVNLKTLSDDTHTTTSLPSTTSSLTHNVQTQNQNPDFAPSQINHTSSSSPTLQIPTDANSGGFHHHINTHNTMISFDPSQLYSPGFMDVSEINASSSMISPLSQEGSSISDSSLMATENKLCVSLPDHAGDETTQVLMNFGFGGYYSDLVNNGFYSHGKIGEFASIFYPHELVDFGYNADMKPQGRN 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2049 307 FunFam Transcription factor RAX3 7 68 - -
Acco05g2049 307 Gene3D - 70 139 - -
Acco05g2049 307 CDD SANT 71 113 IPR001005 -
Acco05g2049 307 SMART sant 67 115 IPR001005 -
Acco05g2049 307 SMART sant 13 64 IPR001005 -
Acco05g2049 307 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Acco05g2049 307 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Acco05g2049 307 CDD SANT 16 62 IPR001005 -
Acco05g2049 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Acco05g2049 307 PANTHER OS09G0431300 PROTEIN 1 218 - -
Acco05g2049 307 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Acco05g2049 307 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Acco05g2049 307 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Acco05g2049 307 Gene3D - 7 68 - -
Acco05g2049 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Acco05g2049 307 MobiDBLite consensus disorder prediction 128 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2049 Acco-ChrAcco05 36857886 36859388 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2049 1 203 MYB Transcription Factor Family AT5G57620 50.855 2.11e-70 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco05g2049 Myb_DNA-binding 1.3e-13 CL0123