Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2044 ATGGGTCTTGCCGATATGTGTAACACAGGCCTCGGCCTCGGTCTTGGCCTTAGTCTTCACCACCATCAGTCTGAGAATTGCTGCCCAGAAATCCGACACAAGAAAGAGGATTATCCGTACAAATGTGACCAGAAGGTTCTATACCCGTCCCTTACGTTAGGTCCGCCTGATGATCAGGAGCCCAATAATCAACAGCTTCTTCCCACTAAGACTGAATCTGTTCATAATTTCCATGCAATAGCTTCTTCTTCTTCGCCCAGCGCCGCCTCTTCCTTCTCCAACTCATCCAGCATCAAGAGGGAGAATAAGGACTTTGTGGGCGACGACCTTGATCTGGAAGTAGAGATTAAAGTTAATAATCCTTCCAAGGTAACAGGCTTCGACGTAGACGACGAGGGTAATCCCAGGAAGAAACTTAGGCTCACCAAAGAACAATCTGCTGTTTTAGAGGACAGCTTCAAAGACCACTCCACTCTCAATCCCAAGCAAAAGCAAGAATTGGCAAGGAAGTTAAACCTGCGTGCCAGACAAGTAGAGGTTTGGTTTCAAAACAGGAGAGCCAGGACAAAACTGAAACAAACGGAAGTTGACTGTGAGTTGCTCAAGAAGTGCTGCGAAACGCTGACGGAAGAGAACAAGAGACTGCAAAAGGAGTTGCAAGAACTCAGATCAATGAAAACGACGGCGTCGCAGGGACCCTTGTATATGCAGCTTCCGGCAGCCACCCTCACCTTATGCCCTTCTTGTGAGAGAATCTGCGGAAGCGGAGGCGGCGCCGCCGCCAACGGCTCTCCTGCTACCACCGCCTTCCTTATCGGATCAAAGGCCCATCATCACTTGTACAAAAGCAACCACCCATTCACCCACTCATCCGCAGCTTGCTAG 885 0.4949 MGLADMCNTGLGLGLGLSLHHHQSENCCPEIRHKKEDYPYKCDQKVLYPSLTLGPPDDQEPNNQQLLPTKTESVHNFHAIASSSSPSAASSFSNSSSIKRENKDFVGDDLDLEVEIKVNNPSKVTGFDVDDEGNPRKKLRLTKEQSAVLEDSFKDHSTLNPKQKQELARKLNLRARQVEVWFQNRRARTKLKQTEVDCELLKKCCETLTEENKRLQKELQELRSMKTTASQGPLYMQLPAATLTLCPSCERICGSGGGAAANGSPATTAFLIGSKAHHHLYKSNHPFTHSSAAC 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2044 294 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 11 258 - -
Acco05g2044 294 FunFam Homeobox-leucine zipper protein 18 121 197 - -
Acco05g2044 294 SMART halz 192 238 IPR003106 GO:0006355|GO:0043565
Acco05g2044 294 Pfam Homeobox associated leucine zipper 192 226 IPR003106 GO:0006355|GO:0043565
Acco05g2044 294 ProSiteProfiles 'Homeobox' domain profile. 132 192 IPR001356 GO:0003677
Acco05g2044 294 SMART HOX_1 134 196 IPR001356 GO:0003677
Acco05g2044 294 CDD homeodomain 135 193 IPR001356 GO:0003677
Acco05g2044 294 ProSitePatterns 'Homeobox' domain signature. 167 190 IPR017970 GO:0000981|GO:0006355
Acco05g2044 294 Gene3D - 129 197 - -
Acco05g2044 294 SUPERFAMILY Homeodomain-like 134 200 IPR009057 -
Acco05g2044 294 Coils Coil 198 232 - -
Acco05g2044 294 Pfam Homeodomain 136 190 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2044 Acco-ChrAcco05 36800217 36801381 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2044 1 294 Homeobox Transcription Factor Family AT2G22800 48.208 1.50e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Acco05g2044 Homeodomain 4.2e-17 CL0123