Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2031 ATGGGTGGTCATGAAAATGCCATGAGGTTTCAACATGGACAAGAGAAAATCCTGAATTGCACGTCATCTGGTTTGAGCACCAATGTTTCTGAGATTGCAATTAGCTCTGTGTCTATGGCCAAGCCTCGTGTTGCTACTAATCCTTTTCTTGTGTCTTCTTCTTCCACCTGGGATCCTATTGTTTCCTTGAGTCAGACTCAAACTTTTGGAGGCTCTTCCATGGTTTCTCACAGTGAGTTTGGCGGTTCATCTTACCCTTTTGTGTTGGAAAATCAGGGAATGAGCAGCACATCTCACCACCTTGTCCAATATGTGTCCGAATCTAATTTCGCTGTTCCTTCCTATGCAAGTGGAAGCTTCTCCGAAATGGGCTCTTTTCCCCAACACGGCGGGTGCTCTGATTTAGCTAATACAAGGTATGGCCCAAGTTACAATCAAAACGAGGAGGCAGCCATGAAAAGGGCTTCATTGAATGGTTCACAATCTCAGCTTGAGGATCCAACTCCTGAAGGAGGAGCCACAGGATCTGCACCTAATGCAAGTAGAAGAAAACGAGGGCTTGATCAGAATCCTAGGTTCAGTCCAAACAAGAATGCTGAAGGGGAACCAATGAAGGATTCTTCTGGAAAGAGCTCAGATGGGGCAAAAGAACAAGAGGAAAAGAAACAAAAGGTTGAGCAAAACAGTACTGGTGCGGATTTGCGTAGTAAGCAATCATCAAAGCAAGTTAAAGACAACTCTCATAGTGGAGAAGCTCCCAAAGAGAATTTCATTCATGTGAGGGCTCGAAGAGGTCAAGCTACAAACAGTCATAGCCTTGCAGAAAGGGTAAGAAGAGAGAAGATTAGTGAGCGAATGAGGCTGCTTCAAGAACTCGTTCCAGGATGCAACAAGATAACTGGGAAAGCAGTGATGCTGGATGAGATTATTAACTATGTGCAATCGTTGCAGCAACAGGTTGAGTTTTTGTCAATGAAACTTGCCACCGTGAACCCAGAACTGAATTTTGATGTAGAACGGATCCTATCCAAAGATATTTTTCAGTCGCGCATCGCAAATGGGACTATTGGTGGATATGGTATGAACTCCTCTCACCCGTTCACTAGTGGAAGCCTTCAGGGAACTCTACCCAACACATCGCCACCATTCCCTCCCCTGGCTCAGAGTATTTTAGAGCATGAGTTCCAAAACTTGTATGGAATGGGATATGATTCCAGTACAGCTCTTGACAATGCAGGGCCCAGTGGGAGGTTGAAAACAGAGTTGTAA 1269 0.4484 MGGHENAMRFQHGQEKILNCTSSGLSTNVSEIAISSVSMAKPRVATNPFLVSSSSTWDPIVSLSQTQTFGGSSMVSHSEFGGSSYPFVLENQGMSSTSHHLVQYVSESNFAVPSYASGSFSEMGSFPQHGGCSDLANTRYGPSYNQNEEAAMKRASLNGSQSQLEDPTPEGGATGSAPNASRRKRGLDQNPRFSPNKNAEGEPMKDSSGKSSDGAKEQEEKKQKVEQNSTGADLRSKQSSKQVKDNSHSGEAPKENFIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELNFDVERILSKDIFQSRIANGTIGGYGMNSSHPFTSGSLQGTLPNTSPPFPPLAQSILEHEFQNLYGMGYDSSTALDNAGPSGRLKTEL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2031 422 Gene3D - 263 337 IPR036638 GO:0046983
Acco05g2031 422 CDD bHLH_AtBPE_like 256 341 - -
Acco05g2031 422 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 264 334 IPR036638 GO:0046983
Acco05g2031 422 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 154 364 IPR024097 GO:0006355
Acco05g2031 422 SMART finulus 272 322 IPR011598 GO:0046983
Acco05g2031 422 MobiDBLite consensus disorder prediction 203 228 - -
Acco05g2031 422 MobiDBLite consensus disorder prediction 238 261 - -
Acco05g2031 422 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 266 316 IPR011598 GO:0046983
Acco05g2031 422 MobiDBLite consensus disorder prediction 152 276 - -
Acco05g2031 422 MobiDBLite consensus disorder prediction 152 169 - -
Acco05g2031 422 Pfam Helix-loop-helix DNA-binding domain 269 317 IPR011598 GO:0046983
Acco05g2031 422 FunFam Basic helix-loop-helix transcription factor 263 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2031 Acco-ChrAcco05 36689704 36691774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2031 1 422 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G10120 42.459 2.51e-80 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco05g2031 HLH 4.4e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2031 05 36689704 36691774 Acco05g2031 05 36689704 36691774 ECH