Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2030 ATGAATGATAGCAGGAACAACAACAACAACGATGGGAGTGGGGATGATAATAGTAGCAATCAAAACTGGTTGGGGTTTTCTCTGTCACCCCACATGAAAATGGAGCTATCTTCTGGTCATCCCCTCCATCATCACGATCATCATCAACCTCAGGCTTCAACTGCTGCCGTTTCTAGCTCTGTTCCGGCAACCTTCTGTTTGTCGCCTTCTCAGCTCAGCAGTTACGGAATATGTTATGGTGCGGCGGAGAACACAGGCTTTCATTCTCCTTTGACCGTCATGCCTCTCAAGTCCGACGGCTCACTCTGCATAATGGAAGCTCTCACTACATCACAAACTCCCCAAGTGATGATGCCGGATTCGTCTCCGAAACTGGAGGACTTTCTTGGCGGTGCAACTATGGGGACTCACGATGCAATGTCTTTAAGCCTCGACAGCATCTACTATGGCACTCAGAACGCACATCCTCAAGCCCCCAGAGACCATTCTCTTGACTTTCTTTCAGAGCCTTTCAGACACCACCAAGACTCCATTTCTGTGCACTCACATCATCCTTATTATTCTGGAATTGCTTGCCATTCTTCTATTTATCCATCACCATTGGAGCATCAAAGCAAAGATCCTCAAATGCATCCACCAATGTCGTCCGAGGAAGGTATCACTTGTCTAAAAAACTGGGTGACTCCTGGCAGGGACTATCCTGTTCAACAGCAGAAAAAGAATGGAAGCACGGAGGATGACGGTGGTGGGGGAGCTTCTGGGTCAGTTGGTAAAGTTGGGTGCGGAGATTTTCAGTCTCTTGGCTTATCTGTGAGCCCGGGTTCACAATCTAGCTGTGTAACTGCGCCACAGCAGATTTCACCCTCTGCCACTGACGTGGTTGCAATGGAAGCCAAGAAGAGAGGGCCCGGAAAGTTGGGCCAGAAACAGCCCGTGCATAGGAAATCGATCGACACTTTTGGACAAAGAACGTCTCAGTTCCGAGGCGTCACAAGGCACAGATGGACTGGTAGATATGAAGCGCATTTATGGGATAACAGTTGTAAGAAGGAAGGGCAGACGAGGAAAGGAAGACAAGTTTATTTGGGGGGCTATGATATGGAAGAGAAAGCTGCAAGAGCCTATGATCTTGCTGCCCTCAAGTACTGGGGGCCCTCAACCCACATTAACTTTCCGTTAGAAAATTACCAGGTGGAACTTGAGGAGATGAAGAACATGAGCAGGCAGGAGTACGTTGCCCACTTGAGAAGAAAAAGCAGCGGTTTTTCCAGAGGGGCTTCAATGTATAGAGGAGTGACGAGGCATCATCAACATGGCAGATGGCAAGCAAGGATTGGTAGAGTTGCAGGAAACAAGGACCTTTATCTTGGAACATTCAGTACTCAGGAGGAAGCAGCAGAAGCATATGACATAGCTGCAATCAAGTTCCGAGGTGTGAACGCAGTGACCAACTTTGACATATCTAGGTACGATGTGGAAAGGATCATGGCCAGCAATACCCTCCTGGCCGGTGAGCTGGCTCGAAGAAACAAAGACGCCCAGCCGAGGATGGAAGCCATTGAGTACAATGTGACATCGAACCAGAGCAATGGGGAAGCAGTTCAAGCCCAAAGGAACAACAACGAGAACAACGGTTCAGAGTGGAAGATGTTGTATTCTCCTAATAGCTGTGAGCAGAAAACCGTGAACTGCGGAAATTACAGGAATACAGCCATATCTGTGGCCCTACAGGATCTCATTGGGATTGACTCGGATGGCTCGGGTCATCATGCCACGCTGGAGGACACTACAAAAATAGGCCCTCGTTTTTCAAACCCATCCTCATTGGTCACGAGCCTAAGCAGCTCAAGAGAGGGAAGCCCGGATAAAACTGGTCCCACCATTTTGTTTCCTAAGCCTCCTCCAATAGCATCAAAGATTGTTAGCCCCATAGGTAGTGGAGTTAGTTCATGGTTTCCTTCAGCAGCATCTCAGAGTTTGAGGCCAGCTTCAATGGCTCACTTGCCAGTTTTTGCTGCTTGGAACGATAGTTAG 2034 0.4848 MNDSRNNNNNDGSGDDNSSNQNWLGFSLSPHMKMELSSGHPLHHHDHHQPQASTAAVSSSVPATFCLSPSQLSSYGICYGAAENTGFHSPLTVMPLKSDGSLCIMEALTTSQTPQVMMPDSSPKLEDFLGGATMGTHDAMSLSLDSIYYGTQNAHPQAPRDHSLDFLSEPFRHHQDSISVHSHHPYYSGIACHSSIYPSPLEHQSKDPQMHPPMSSEEGITCLKNWVTPGRDYPVQQQKKNGSTEDDGGGGASGSVGKVGCGDFQSLGLSVSPGSQSSCVTAPQQISPSATDVVAMEAKKRGPGKLGQKQPVHRKSIDTFGQRTSQFRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQVELEEMKNMSRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVERIMASNTLLAGELARRNKDAQPRMEAIEYNVTSNQSNGEAVQAQRNNNENNGSEWKMLYSPNSCEQKTVNCGNYRNTAISVALQDLIGIDSDGSGHHATLEDTTKIGPRFSNPSSLVTSLSSSREGSPDKTGPTILFPKPPPIASKIVSPIGSGVSSWFPSAASQSLRPASMAHLPVFAAWNDS 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2030 677 Gene3D AP2/ERF domain 428 488 IPR036955 GO:0003700|GO:0006355
Acco05g2030 677 Gene3D AP2/ERF domain 325 394 IPR036955 GO:0003700|GO:0006355
Acco05g2030 677 MobiDBLite consensus disorder prediction 198 217 - -
Acco05g2030 677 MobiDBLite consensus disorder prediction 1 27 - -
Acco05g2030 677 SMART rav1_2 428 492 IPR001471 GO:0003700|GO:0006355
Acco05g2030 677 SMART rav1_2 326 398 IPR001471 GO:0003700|GO:0006355
Acco05g2030 677 MobiDBLite consensus disorder prediction 227 257 - -
Acco05g2030 677 MobiDBLite consensus disorder prediction 591 632 - -
Acco05g2030 677 SUPERFAMILY DNA-binding domain 325 394 IPR016177 GO:0003677
Acco05g2030 677 CDD AP2 427 488 IPR001471 GO:0003700|GO:0006355
Acco05g2030 677 PRINTS Ethylene responsive element binding protein signature 327 338 IPR001471 GO:0003700|GO:0006355
Acco05g2030 677 PRINTS Ethylene responsive element binding protein signature 468 488 IPR001471 GO:0003700|GO:0006355
Acco05g2030 677 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 115 559 - -
Acco05g2030 677 Pfam AP2 domain 326 384 IPR001471 GO:0003700|GO:0006355
Acco05g2030 677 Pfam AP2 domain 429 478 IPR001471 GO:0003700|GO:0006355
Acco05g2030 677 ProSiteProfiles AP2/ERF domain profile. 326 392 IPR001471 GO:0003700|GO:0006355
Acco05g2030 677 FunFam AP2-like ethylene-responsive transcription factor 427 488 - -
Acco05g2030 677 SUPERFAMILY DNA-binding domain 427 488 IPR016177 GO:0003677
Acco05g2030 677 CDD AP2 325 392 IPR001471 GO:0003700|GO:0006355
Acco05g2030 677 MobiDBLite consensus disorder prediction 598 622 - -
Acco05g2030 677 MobiDBLite consensus disorder prediction 1 55 - -
Acco05g2030 677 ProSiteProfiles AP2/ERF domain profile. 428 486 IPR001471 GO:0003700|GO:0006355
Acco05g2030 677 FunFam AP2-like ethylene-responsive transcription factor ANT 325 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2030 Acco-ChrAcco05 36667894 36671152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2030 11 513 AP2-EREBP Transcription Factor Family AT4G37750 52.166 4.69e-158 465
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Acco05g2030 AP2 2.9e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2030 05 36667894 36671152 Acco05g2030 05 36667894 36671152 ECH