Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2027 ATGCTGCTTCACCAACGAGACTCTTTGCTGAGATCTAATACTTCTCCCTTTTCTGATTCTCAAATGCTCACTTTCTCTTCTCCCAAATCGGAGCCTCAGTTAACGGACAAGGCCTCTCCGAATGCCGCATTGCCCTTTTCTTATCACCAACTAGCTGCTTACACCAGGAATACAGGTTACGGCTCTGGAGGCATGCACATGCACGGGGTTTTGACAGCAACCAGAGGGCCATTCACTCCCTCGCAGTGGATGGAGCTGGAACACCAGGCCTTGATCTACAAGTACATCACTGCAAATATGGCCGTACCTTCTCATCTCCTCATCCCTATAAGAAAAGCTCTCGATTCTGCTGGCTTCGGTAGCTTTTCCAACGGACTTCTGAGACCCAATACCCTGGGATGGGGCGGTTTCCATCTGGGATTCTCGAACAACACTGATCCTGAACCGGGAAGGTGTAGGAGAACAGATGGGAAGAAATGGCGGTGCTCTAGAGATGCCGTTGTGGACCAGAAGTACTGTGAGCGACACATGAACAGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCGTCTCTGCCGCCACCACTACCAATAATGCCTCAAAGCTCATTCCTAATGCTTCATCCTCTGCCTCAGTAGTGGTGCCTGGCAATGCTGTGTCTACTACCCTATCCTTTGCCCATTATCAATCCAAGAATTTGCAGCCTCTTTCCTCTCATAATTCTGCTCCAACCAACATTGACAGAATGTTTATGAACAACAAGGAGAATGCTAGTGAGAGAGTGCAAGACGGTTCAGCTCTTCCCATGCTACCTCCCACCCTTGATATGAAGCCGAAGGAAAACCCCTTTATGATACAAAAAGAGCAAATCCCATATGAAGAATCGTCGAGGAATGAGTTTGGGCTTGTCACTTCTGACTCTTTACTTAACCCTTCTCATAAAAGTTTTGGTTCTTCACCAAACCCCTCTTACAGAGACGCTGAGTCACAACAATCCCTTCGTCATTTCATGGATGACTGGCCCAAGCTCGACATGCAGTCAGATAGGACTCAACTTTCGATAGCTATCCCCATGACCTCGAATTTCATGTCATCCACTTCCTCTCCTGCCAATGAGAAAGTCACATTGTCACCCCTTAGACTGTCAAGGGAGCTAGATCCAATTCAAATGGGTTTGGGAGTGGGAATTGGTCTGCATGAATCAAGTAATAGGCAGGCAAATTGGATTCCAATTGCCTGGGAAAGTTCCATGGGAGGTCCTCTTGGTGAGGTTCTTCATCTCAGTAACAATACAAGTGATTGCTCCATGAACTCATCTCTTAACCTCATGACAGATGGTTGGGAAAATAGTTCTTCATTAGGTTCATCTCCGACGGGAGTCTTGCATAAGACCGCGTTTGGATCAGTTTCCAATAGCAACTCTGGCAGCAGTCCGCAGGCTGAGAATAATAAAGGACTCGAAGGAGCCAGCTTGTGCAATGACCTGCTTGGTTCCACTCTCGGCAATTCCTCCTCTTTGCCCAACTTGTAA 1548 0.478 MLLHQRDSLLRSNTSPFSDSQMLTFSSPKSEPQLTDKASPNAALPFSYHQLAAYTRNTGYGSGGMHMHGVLTATRGPFTPSQWMELEHQALIYKYITANMAVPSHLLIPIRKALDSAGFGSFSNGLLRPNTLGWGGFHLGFSNNTDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHAVSAATTTNNASKLIPNASSSASVVVPGNAVSTTLSFAHYQSKNLQPLSSHNSAPTNIDRMFMNNKENASERVQDGSALPMLPPTLDMKPKENPFMIQKEQIPYEESSRNEFGLVTSDSLLNPSHKSFGSSPNPSYRDAESQQSLRHFMDDWPKLDMQSDRTQLSIAIPMTSNFMSSTSSPANEKVTLSPLRLSRELDPIQMGLGVGIGLHESSNRQANWIPIAWESSMGGPLGEVLHLSNNTSDCSMNSSLNLMTDGWENSSSLGSSPTGVLHKTAFGSVSNSNSGSSPQAENNKGLEGASLCNDLLGSTLGNSSSLPNL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2027 515 MobiDBLite consensus disorder prediction 194 208 - -
Acco05g2027 515 MobiDBLite consensus disorder prediction 12 39 - -
Acco05g2027 515 MobiDBLite consensus disorder prediction 179 208 - -
Acco05g2027 515 SMART QLQ_2 76 112 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco05g2027 515 MobiDBLite consensus disorder prediction 473 492 - -
Acco05g2027 515 ProSiteProfiles WRC domain profile. 146 190 IPR014977 -
Acco05g2027 515 PANTHER GROWTH-REGULATING FACTOR 5 21 367 IPR031137 GO:0005634|GO:0006351|GO:0032502
Acco05g2027 515 MobiDBLite consensus disorder prediction 12 37 - -
Acco05g2027 515 Pfam WRC 147 189 IPR014977 -
Acco05g2027 515 ProSiteProfiles QLQ domain profile. 77 112 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco05g2027 515 Pfam QLQ 77 111 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2027 Acco-ChrAcco05 36633297 36636222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2027 3 473 GRF Transcription Factor Family AT2G22840 43.434 6.88e-99 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Acco05g2027 WRC 4.6e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g2027 05 36633297 36636222 Acco05g2027 05 36633297 36636222 ECH