Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2015 ATGATGATGCCGGGTCCGCAATTGATGGACGATGCGTATGCCAGATCTATTCCTGAGGTACTCGATTTCTTTGGAGTGAACCCAACAAAGGGTCTTTCTGATAGCCAGGTGGCACAACATGCTAGACTTTATGGTGCAAACGGGGCGCCTTTTTGGAAACTGGTCTTGAAACAATTTGATGATTTGCTTGTGAAGATATTAATAGCAGCTGCACTTATCTCTTTCATTCTCGCTTTAATCAATGGAGAAACGGGCTTAATGGCATTTCTGGAGCCTTCTGTTATTCTAATGATATTGGCTGCAAATGCAGCAGTTGGGGTGATTACAGAAACAAATGCTGAAAAAGCTCTTGAGGAGCTACGGGCCTATCAAGCTGATGTGGCAACTGTACTTCGAAATGGTTGTTTTTCCATACTCCCAGCAACTGAAATTGTTCCTGGCGATATTGTGGAAATTTCTGTTGGGTGCAAAATTCCTGCTGATATGAGGATGATTGAGATGTTGAGTAATGGAGTACGTGTTGATCAGGCTATTCTTACAGGTGAGAGCAACTCCGTGGCAAAAGAACTTGAAATTACCACAGCAACAAAGGCTGTATATCAAGACAAAACAAACATATTGTTCTCGGGAACAGTTGTGGTTGCTGGTAGGGCAAGAGCAATTGTGGTGGGAGTTGGTCATAACACTGCCATGGGCAGCATACGAGATTCAATGTTGCAAACAGAAGATGAGGTGACGCCATTGAAGAAGAAGCTGGACGAGTTTGGTACCTTTTTGGCCAAGGTTATTGCAGGGATTTGCATATTGGTGTGGATTGTAAATATCGGACATTTTCGTGATCCTTCTCATGGGGGTTTCTTGCAGGGTGCCATTCATTATTTTAAGATTGCTGTTGCTCTGGCAGTTGCAGCAATTCCGGAAGGGCTCCCTGCTGTAGTTACAACGTGTTTGGCTCTTGGAACGAAGCGGATGGCTAGGTTGAATGCTATTGTTCGGTCTTTACCTTCTGTGGAGACCCTGGGCTGCACTACTGTAATTTGCAGTGACAAAACCGGAACTTTGACAACCAATATGATGTCTGTGACAAAGATATGTGTGGTTCACTCTGCAAAACATAGTCCTGTTGTTGCTGAATACAATGTTAGCGGAACAACATATGCGCCTGAAGGCATAATCTTTGACAGTTTGGGAGTACAGCTTGACAATCCAGCTCGATTGCCATGTCTTCTTCACACAGCAATGTGTTCTGCCCTTTGCAATGAGTCCACCCTGCAGTATAACCATGATAAAGGAAAGTATGAAAAAATAGGAGAGTCAACTGAAGTAGCACTCCGTGTCCTGGCAGAAAAAGTTGGTCTCCCTGGTTTTGATTCTATGCCATCAGCCTTGAACATGTTGAGCAAGCATGAGCGGGCATCTTACTGTAATCATTATTGGGAGGAACAATTTAGAAAAATAGATCTGTTGGATTTTTCTCGAGATCGGAAAATGATGAGTGTCCTTTGCAACCGAAATTTGCTTCATGTGTTGTTCTGCAAGGGTGCTCCAGAGAGTATCATGTCTAGGTGTTCAACCATCATGTGTAATGATGACGATTCCATTGTGCCACTTACTGCTGATGTTCGAGCTGAGCTAGGCTCAAGATTCCACAGTTTTGCAGGAAAAGAAACATTGAGATGCCTAGCGTTAGCCCTGAAATGGATGCCCTTGAGTCAACAACGTCTTTCCTATGATGATGAGAAAGATCTTACTTTTATTGGGTTGGTTGGAATGCAAGATCCACCAAGAGATGAAGTAAGAAATGCAATGCTTTCATGCATGAACGCTGGCATACGTGTTATAGTTGTTACAGGGGATAACAAGTCCACTGCTGAGTCACTTTGCCGCAAGATAGGGGCTTTTGACCACTTCTTGGAATTTAATGAACATTCCTATACTGCTTCTGAGTTTGAAGAACTTCCAGCTATGCAGCAAACTCTTGCTTTGCAACGTATGGCTCTTTTTGCCAGGGTTGAGCCATCTCATAAAAGGATGCTGGTTGAAGCATTGCAGCGCCAGAATGAAGTGGTTGCTATGACTGGTGACGGTGTCAATGATGCACCTGCACTAAAGAAGGCAGACATAGGAATTGCTATGGGCTCAGGCACAGCTGTTGCCAAGAGTGCTTCAGACATGGTACTGAGTGATGATAACTTTGCTACAATTGTTGCGGCTGTGGCAGAGGGAAGGGCCATTTACAGCAATACAAAGCAGTTCATTAGATACATGATCTCTTCTAATATCGGTGAAGTAGTCTGTATATTTGTGGCGGCTGTGCTTGGAATTCCCGATACCCTTGCCCCTGTCCAGCTGCTTTGGGTCAATTTGGTTACTGACGGATTGCCTGCCACTGCTATTGGCTTTAATAAGCCAGATTCTGATGTAATGAAGGCCAAACCTCGCAAGGTGAATGAAGCAGTGGTTACAGGGTGGTTGTTCTTCCGTTATCTAGTAATTGGAGCTTATGTCGGTCTTGCTACTATTGCTGGTTTTATTTGGTGGTTTGTTTACTCTGACGGTGGCCCAAAATTGCCATATACGGAATTGATGAATTTTGACTCTTGCCCAACAAGGCAGACAGCCTACCCATGCAGTATATTTGATGATCGACACCCATCTACTGTAGCAATGACTGTGCTTGTCGTTGTTGAGATGTTCAATGCTTTGAACAATCTTAGCGAGAACCAATCTCTTCTGGTTATCCCTCCGTGGAGTAACTTGTGGCTTGTTGGTTCAATAATTCTTACTTTGCTTCTTCACATGCTTATTTTGTATGTGCATCCTCTCTCAGTTCTTTTCTCTGTAACACCATTATCCTGGGATGATTGGTTGATTGTCCTGTATCTTTCTTTACCTGTTATATTCATTGATGAGGTGTTAAAGTTATTCTCCAGGCGTCCCATTGGCCTGAGGTTCAGATTATGGTTCTGGAGGCGTGATTTACTTCCAAAAAGAGAATTGCGTGATAAGTAA 3012 0.4353 MMMPGPQLMDDAYARSIPEVLDFFGVNPTKGLSDSQVAQHARLYGANGAPFWKLVLKQFDDLLVKILIAAALISFILALINGETGLMAFLEPSVILMILAANAAVGVITETNAEKALEELRAYQADVATVLRNGCFSILPATEIVPGDIVEISVGCKIPADMRMIEMLSNGVRVDQAILTGESNSVAKELEITTATKAVYQDKTNILFSGTVVVAGRARAIVVGVGHNTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICILVWIVNIGHFRDPSHGGFLQGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVTKICVVHSAKHSPVVAEYNVSGTTYAPEGIIFDSLGVQLDNPARLPCLLHTAMCSALCNESTLQYNHDKGKYEKIGESTEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHYWEEQFRKIDLLDFSRDRKMMSVLCNRNLLHVLFCKGAPESIMSRCSTIMCNDDDSIVPLTADVRAELGSRFHSFAGKETLRCLALALKWMPLSQQRLSYDDEKDLTFIGLVGMQDPPRDEVRNAMLSCMNAGIRVIVVTGDNKSTAESLCRKIGAFDHFLEFNEHSYTASEFEELPAMQQTLALQRMALFARVEPSHKRMLVEALQRQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLSDDNFATIVAAVAEGRAIYSNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKPDSDVMKAKPRKVNEAVVTGWLFFRYLVIGAYVGLATIAGFIWWFVYSDGGPKLPYTELMNFDSCPTRQTAYPCSIFDDRHPSTVAMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVGSIILTLLLHMLILYVHPLSVLFSVTPLSWDDWLIVLYLSLPVIFIDEVLKLFSRRPIGLRFRLWFWRRDLLPKRELRDK 1003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2015 1003 Pfam Cation transporting ATPase, C-terminus 777 976 IPR006068 -
Acco05g2015 1003 Gene3D - 57 978 - -
Acco05g2015 1003 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 689 982 - -
Acco05g2015 1003 Gene3D - 344 737 IPR023214 -
Acco05g2015 1003 PRINTS P-type cation-transporting ATPase superfamily signature 609 619 - -
Acco05g2015 1003 PRINTS P-type cation-transporting ATPase superfamily signature 175 189 - -
Acco05g2015 1003 PRINTS P-type cation-transporting ATPase superfamily signature 587 598 - -
Acco05g2015 1003 PRINTS P-type cation-transporting ATPase superfamily signature 693 712 - -
Acco05g2015 1003 PRINTS P-type cation-transporting ATPase superfamily signature 716 728 - -
Acco05g2015 1003 PRINTS P-type cation-transporting ATPase superfamily signature 347 361 - -
Acco05g2015 1003 SFLD p-type atpase 328 745 IPR044492 -
Acco05g2015 1003 SUPERFAMILY HAD-like 580 741 IPR036412 -
Acco05g2015 1003 Pfam E1-E2 ATPase 124 326 - -
Acco05g2015 1003 ProSitePatterns E1-E2 ATPases phosphorylation site. 349 355 IPR018303 -
Acco05g2015 1003 FunFam Calcium-transporting ATPase 357 594 - -
Acco05g2015 1003 PRINTS H+-transporting ATPase (proton pump) signature 724 749 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco05g2015 1003 PRINTS H+-transporting ATPase (proton pump) signature 693 709 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco05g2015 1003 PRINTS H+-transporting ATPase (proton pump) signature 665 681 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco05g2015 1003 Coils Coil 113 133 - -
Acco05g2015 1003 SMART Cation_ATPase_N_a_2 11 79 IPR004014 -
Acco05g2015 1003 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 354 591 IPR023299 GO:0000166
Acco05g2015 1003 NCBIfam calcium-translocating P-type ATPase, SERCA-type 55 848 IPR005782 GO:0005388|GO:0006816|GO:0016020
Acco05g2015 1003 CDD P-type_ATPase_SERCA 13 978 - -
Acco05g2015 1003 Pfam Cation transporter/ATPase, N-terminus 14 74 IPR004014 -
Acco05g2015 1003 SFLD C1.7: P-type atpase like 328 745 - -
Acco05g2015 1003 Gene3D - 30 239 - -
Acco05g2015 1003 NCBIfam HAD-IC family P-type ATPase 94 372 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco05g2015 1003 NCBIfam HAD-IC family P-type ATPase 664 778 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco05g2015 1003 Pfam haloacid dehalogenase-like hydrolase 584 707 - -
Acco05g2015 1003 Gene3D - 357 594 IPR023299 GO:0000166
Acco05g2015 1003 PANTHER CALCIUM-TRANSPORTING ATPASE 16 980 - -
Acco05g2015 1003 Pfam Cation transport ATPase (P-type) 417 526 - -
Acco05g2015 1003 FunFam Calcium-transporting ATPase, putative 211 343 - -
Acco05g2015 1003 FunFam Sodium/potassium-transporting ATPase subunit alpha 588 732 - -
Acco05g2015 1003 SUPERFAMILY Calcium ATPase, transduction domain A 126 237 IPR008250 -
Acco05g2015 1003 FunFam Calcium-transporting ATPase 114 239 - -
Acco05g2015 1003 SUPERFAMILY Calcium ATPase, transmembrane domain M 10 979 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2015 Acco-ChrAcco05 36513375 36531718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2015 9 1003 Primary Pumps ATPases(2) AT1G10130 81.918 0.0 1672