Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g2001 ATGGATCATTCACTGTCCAGCCTTCTCTGTCAAGAAAACCATCAAGGAGAGGTGGCGGTGGTGTATGAAGATTTATCCGTTCAGTTTGAGGATTCTGGTGCTTCAGAGGATGAGTATTTGCAAGTTTTGATTGAGAAAGAGATCGGCGTTGGGTTTGGAAGGGAAGAATCTTCTTTGTTGTTGATGAGTGATTGGATCAAAACAGCTCGCTTGTATGCCATCAATTGGATTCTCAAAACAAGAGCAACATTCGGCTTTCGCTTTCAAACGGCTTACTTGTCTGTCACATATTTGGACCGATTCCTTTCTAGACGGTTCATTGATAGTGAGAAGTGTTGGGCATTTCGGTTACTATCAGTTGCATGCCTTTCTTTGGCTGCTAAGATGGAGGAATGCGATGTTCCATCGCTATCAGAGTTTCCCTCACAAGATTATAACTTTGAAAGCAAAGTGATTCAGAGAATGGAGCTTTTGGTGCTCTCCACATTGGAATGGAACATGAACTTTAGTACTCCTTTTGCCTTCTTACCTTATTTCATCTCAAAGTTCTCCAACCAATCCCCGCCACCTCATATTTGGTCCAACATTATGCAACTCATCTTCACATTAATGACAGAGGTCAATTTGATGGATCATAGGCCATCTGTGATAGCAGCAGCAGCTACTTTGTTGGCAATTGATCCGCATTTGACAAGAAATACATCAGAATTGAAGATTATGAGTTCGGTTTCTCAATATTGGAGTCTCGAAATTGAGAACATATTTGCGTGCTATAATATAATCCAGAGATTACACAAGGAGAAAACTGAAAGAGACAAGGTTATACATTCCTCGAGTCCTCCTCCGCCGCCTAGGGGACCGGTGGCGCCAATCGACAAGCTTGAGACTTCTTTAGTTAGTTCGTCCAAGAGAAGAAGAATCACATTCACTGATCATGAAGAAGGTCAAGGCAAACAAGAGGGAAGTTAA 969 0.42 MDHSLSSLLCQENHQGEVAVVYEDLSVQFEDSGASEDEYLQVLIEKEIGVGFGREESSLLLMSDWIKTARLYAINWILKTRATFGFRFQTAYLSVTYLDRFLSRRFIDSEKCWAFRLLSVACLSLAAKMEECDVPSLSEFPSQDYNFESKVIQRMELLVLSTLEWNMNFSTPFAFLPYFISKFSNQSPPPHIWSNIMQLIFTLMTEVNLMDHRPSVIAAAATLLAIDPHLTRNTSELKIMSSVSQYWSLEIENIFACYNIIQRLHKEKTERDKVIHSSSPPPPPRGPVAPIDKLETSLVSSSKRRRITFTDHEEGQGKQEGS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g2001 322 SUPERFAMILY Cyclin-like 61 168 IPR036915 -
Acco05g2001 322 MobiDBLite consensus disorder prediction 269 322 - -
Acco05g2001 322 FunFam Cyclin-D5-1 65 168 - -
Acco05g2001 322 MobiDBLite consensus disorder prediction 305 322 - -
Acco05g2001 322 SUPERFAMILY Cyclin-like 153 273 IPR036915 -
Acco05g2001 322 SMART Cyclin_C_2 170 283 IPR004367 -
Acco05g2001 322 Gene3D - 67 168 - -
Acco05g2001 322 Pfam Cyclin, C-terminal domain 171 273 IPR004367 -
Acco05g2001 322 Gene3D - 169 259 - -
Acco05g2001 322 PANTHER CYCLINS 38 266 IPR039361 -
Acco05g2001 322 Pfam Cyclin, N-terminal domain 67 168 IPR006671 -
Acco05g2001 322 CDD CYCLIN_AtCycD-like_rpt1 69 165 - -
Acco05g2001 322 SMART cyclin_7 75 161 IPR013763 -
Acco05g2001 322 ProSitePatterns Cyclins signature. 70 101 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g2001 Acco-ChrAcco05 36409366 36410740 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g2001 70 220 Core Cell Cycle Gene Families AT4G37630 48.125 3.58e-41 142