Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1979 ATGGAGACCCGCGCTGCCAAGAGGAGAGCAGAAGCCGCCGCCATCGCCCTGGTTGAATCTCCCAACAAGAAGCGTCTGATATTGAGGGAACTTTCAAATTTACCGAATGTTGCTTTTCCCGCTGTTTTGAATCAGAAATGCCGAAAGAAGACCCTCCCATTGGATCCTAATACCAATATCAAGGACAACGAGGCAGTGCACGTTGTTTCTAAGTTAGATGCTGATGTCAAGCTGAACGATCCACAAGAGACTGATCCTCATGTCTCACAGATCTACCAATACCTTCGTGAAATGGAGATGGAGGCGAAGCGAAGACCAATGCCCGACTACCTCGAGAAGGTTCAAAAGGACGTCGGTGCTAACGCTAGAGGAATATTGATTAATTGGTTAGCGGAGGTGGCGGAAGAGTACATGCTTCTCTCGGACACGTTTCATCTCTCCGTTTCTTACATTGATAGGTTCCTCTCTGCTAACATCGTCAGTAGGCAGAGGCTTCAATTGCTCGGCGTTTCATCTATGCTCATTGCATCGAAGTATGAAGAAATCACCCCTCGTCATGTTGAAGATTTCTGCTACATAACTGATAATACGTACACCCAGGCAGAAGTTGTGGAGATGGAAGCTGATGTACTCAAGTCCTTAAATTTTGAAATGGGAAATCCTACTGTAAATACATTTCTAAGGAGGTTTGCTGAGATTGCTAGTGAGAATCAGAAAACTCGTAAATTGCAGTTTGGGTTTCTGGGACATTATCTTGGTGAACTAAGTTTGTTGGATTACAATTGTGTAAAATTCTTGCCGTCTATGGTGGCTGCATCAGCTATTTTTCTAGCCAGGTTTATCTTATGGCCCAAAGTCCATCCCTGGACTTCAGCTCTGCAACGATACTCTGGATACAAGTCCCATGAGTTAAAGCAATGCGTGCTTATCTTACACGACTTGTACATAGCTAGAAAAGCGGGCTCTTTGCAAACTACAAGGGAGAAGTACAGGCAGCACAAGTTCAAGAATGTGGCAACCTTGCCATCCCCTCCGGAGATACCAGATACTTATTTCGAGAAATGGCGACAAAATGGTAGTTCTATGGCTTGA 1092 0.4478 METRAAKRRAEAAAIALVESPNKKRLILRELSNLPNVAFPAVLNQKCRKKTLPLDPNTNIKDNEAVHVVSKLDADVKLNDPQETDPHVSQIYQYLREMEMEAKRRPMPDYLEKVQKDVGANARGILINWLAEVAEEYMLLSDTFHLSVSYIDRFLSANIVSRQRLQLLGVSSMLIASKYEEITPRHVEDFCYITDNTYTQAEVVEMEADVLKSLNFEMGNPTVNTFLRRFAEIASENQKTRKLQFGFLGHYLGELSLLDYNCVKFLPSMVAASAIFLARFILWPKVHPWTSALQRYSGYKSHELKQCVLILHDLYIARKAGSLQTTREKYRQHKFKNVATLPSPPEIPDTYFEKWRQNGSSMA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1979 363 PANTHER CYCLINS 77 332 IPR039361 -
Acco05g1979 363 SUPERFAMILY Cyclin-like 79 218 IPR036915 -
Acco05g1979 363 Pfam Cyclin, N-terminal domain 91 218 IPR006671 -
Acco05g1979 363 CDD CYCLIN_AtCycA-like_rpt2 221 335 - -
Acco05g1979 363 Gene3D - 91 340 - -
Acco05g1979 363 Gene3D - 106 219 - -
Acco05g1979 363 SMART Cyclin_C_2 221 344 IPR004367 -
Acco05g1979 363 FunFam G2/mitotic-specific cyclin 106 217 - -
Acco05g1979 363 FunFam Cyclin superfamily protein, putative 218 290 - -
Acco05g1979 363 SMART cyclin_7 128 212 IPR013763 -
Acco05g1979 363 SMART cyclin_7 225 313 IPR013763 -
Acco05g1979 363 ProSitePatterns Cyclins signature. 123 154 IPR006671 -
Acco05g1979 363 Pfam Cyclin, C-terminal domain 221 344 IPR004367 -
Acco05g1979 363 SUPERFAMILY Cyclin-like 221 346 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1979 Acco-ChrAcco05 36206401 36208292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1979 3 353 Core Cell Cycle Gene Families AT5G43080 55.932 1.66e-138 396