Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1968 ATGCATATCTTAATGGTCTTCCTCCTTTCTTTTGCTCTGTGTATTCCTTCTTGTTCATCTGCGGCCAGAGATACCCTCCTTCAAGGTTCTTCTCTCTCAGTTGAGAAACCAAACGATACACTCGTGTCAGCCAATGGTGTCTTCTCCGCTGGCTTCTTTAAAGTGGGCGACAATGCTTTCTGTTTTTCCATATGGTTCACAAAATCCAAGCAACCCACTCTTGTCTGGATCGCAAATCGAGATCAACCTGTTAATGGGAAAGTTTCAAGATTAACACTTTCCAACAATGGCAACCTCATTTTGAGCGATGCAGGGGCAACCACCATTTGGACCACAACGACGTCGTCCTCTTCGGAAGTGTATCTCATGCTCAGGGACAACGGCAACCTCATACTTCGTACTTCGCAAGGCACTGTCTTATGGCAAAGCTTTGACTCCCCAACCGATACCCTTCTTCCTGGTCAACCACTCACCGAGAAAGCCAGCCTTATTTCATCCAGAAGCACCACCAACTTTTCCTCTGGTTTCTATAAGCTTTACTTCGACAACGACAATGTTCTTCGGCTTCTTTTCAAAGGCCCTAACGTTTCTAGCGTATACTGGCCTGCCACGTGGAAACTTCCCGTTGATGAAGGCAGGTCCACCTACAACATAACTAAAATTGCTCTGCTAGATCCCTTTGGCCATTTCACCTCCTCTGATACTTTCCAATTCTATCCATCTGATTATGGTGTTAAACGCTATAGGCGATTCAAGGTGGATTCTGATGGTAACTTGCGTCTCTATAGCTTCAGTGAGGAAACTAGCGTGTGGGAGGTCACATGGCAAGTCATAGCCGAACCATGTACGGTTCATGGTCTTTGTGGAGCTAACAGTATGTGCACTTATGACCCTTTCTTAGGAAGGACTTGTTATTGCTTACAAGGATTCAAGCTTAAGAATCCTAATGACTGGACTCAGGGTTGTGAACCGGAATTTACAGCCCCTCGTTGCAATAATTCCGCGGATTTTGGTTTTGTTCATCTTCCCAGAATGGAATTATTCGGCTATGACTTGGAGGTAATCCGTGTAACAAACCTGATACAATGTGAAAATAGGTGCTTGGAGCTTTGTGATGATTGTAAAGGCGTCCAACTCAAATTCAACGAAGTTAGTACTTACAATTGCTACATCAAAACAATATTGCTCAACGGACGAGATTCCCCTAATTTCGATGGAGACGCCTATCTCAAATTGCCAAAATCAACTTTGCTTTCTCTTAAAGTTCCTCTGAAACATGTGCCGTTGAAGTGTTCAGCCAATCTATCTCAGAGCTTGGATAGAACCTACCAAGATCCCAAAAAGAGGACGTGGTTGAATTTTTTGCTTTGGTTCGTTTGTGGGATTGGAGCGTTTGAGATTACCTGTATTTTCTTCGTATGGTTCTTCTTGTTTAGAAGCAGTAAGGAAAATAATAAAGGAGAAAGAAAGCAACTAATTTCTGCTACAGGGTTCCAAAGGTTCACATATTCAGAGCTGAAAAAGGCGACACGTGGATTCAGCGATGAGGTAGGCCGAGGAGCAGGAGGGATCGTGTACAAAGGAACACTAGACAACGATCGTGTGGCAGCAATCAAGTGCCTTATTAATGAAACTAATGAAGGAGAAGCAGAGTTTCTGGCTGAACTTAGCACGATTGGGATGTTGAACCACATGAATTTGATAGACATGTGGGGATACTGCGTGGAGGGGAAGCACAGAATGTTAGTGTACGAGTACATGGAGCATGGATCTTTAGCAGAGAATCTCTGTTCCAATTCACTTGACTGGAACAAAAGGTTTAATATTGCAGTTGGGACAGCCAGAGGTTTAGCTTATTTGCACGAAGAATGCTTGGAATGGGTTCTACATTGCGATGTGAAGCCTCAAAACATACTCTTGGACGCAGAGTTCCAACCCAAAGTAGCTGATTTTGGCTTGTCTAAGCTGCTTAACAGGGGCGACGAGCGTGCCAGTTCTGGTTTTTCCAGAATAAGAGGGACGAGAGGGTACATGGCTCCAGAATGGGTGTACAATCTGCGAATTACTTCTAAAGTGGATGTATATAGCTACGGAATTGTGGTGTTGGAAATGATAACTGGAAAAAGTCCAATGGGAATACATAGCCAAGAAAATGGAGGAGGAATAGATCAAAGGAGGTTGGTGACGTGGGTGAAGGAGAAGTTGAATGGTGCTTCTGAGAGGGAGAGTAGTTGGATTGAGGAGATAGCAGATGGGAATATGGAAGGAAATTACGAGGCTGCACAGTTGGAGTTGTTGGTGAAAGTGGCTTTGCGGTGTGTGGAAGATGACATGGACGCAAGGCCCTCCATGAGCCAAGTAGTGGAGATGCTTCAGTTTCCAGAATATAGATCCTTCCAATAA 2403 0.4419 MHILMVFLLSFALCIPSCSSAARDTLLQGSSLSVEKPNDTLVSANGVFSAGFFKVGDNAFCFSIWFTKSKQPTLVWIANRDQPVNGKVSRLTLSNNGNLILSDAGATTIWTTTTSSSSEVYLMLRDNGNLILRTSQGTVLWQSFDSPTDTLLPGQPLTEKASLISSRSTTNFSSGFYKLYFDNDNVLRLLFKGPNVSSVYWPATWKLPVDEGRSTYNITKIALLDPFGHFTSSDTFQFYPSDYGVKRYRRFKVDSDGNLRLYSFSEETSVWEVTWQVIAEPCTVHGLCGANSMCTYDPFLGRTCYCLQGFKLKNPNDWTQGCEPEFTAPRCNNSADFGFVHLPRMELFGYDLEVIRVTNLIQCENRCLELCDDCKGVQLKFNEVSTYNCYIKTILLNGRDSPNFDGDAYLKLPKSTLLSLKVPLKHVPLKCSANLSQSLDRTYQDPKKRTWLNFLLWFVCGIGAFEITCIFFVWFFLFRSSKENNKGERKQLISATGFQRFTYSELKKATRGFSDEVGRGAGGIVYKGTLDNDRVAAIKCLINETNEGEAEFLAELSTIGMLNHMNLIDMWGYCVEGKHRMLVYEYMEHGSLAENLCSNSLDWNKRFNIAVGTARGLAYLHEECLEWVLHCDVKPQNILLDAEFQPKVADFGLSKLLNRGDERASSGFSRIRGTRGYMAPEWVYNLRITSKVDVYSYGIVVLEMITGKSPMGIHSQENGGGIDQRRLVTWVKEKLNGASERESSWIEEIADGNMEGNYEAAQLELLVKVALRCVEDDMDARPSMSQVVEMLQFPEYRSFQ 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1968 800 Pfam D-mannose binding lectin 73 159 IPR001480 -
Acco05g1968 800 CDD B_lectin 36 147 IPR001480 -
Acco05g1968 800 SMART serkin_6 511 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1968 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 202 IPR036426 -
Acco05g1968 800 Gene3D Phosphorylase Kinase; domain 1 477 586 - -
Acco05g1968 800 PANTHER OS07G0415500 PROTEIN 4 792 - -
Acco05g1968 800 CDD PAN_AP_plant 327 413 - -
Acco05g1968 800 SUPERFAMILY Protein kinase-like (PK-like) 489 794 IPR011009 -
Acco05g1968 800 PIRSF SRK 1 795 IPR024171 GO:0004674
Acco05g1968 800 Gene3D Transferase(Phosphotransferase) domain 1 587 797 - -
Acco05g1968 800 FunFam S-receptor-like serine/threonine-protein kinase 480 586 - -
Acco05g1968 800 FunFam Serine/threonine-protein kinase 587 798 - -
Acco05g1968 800 CDD STKc_IRAK 517 792 - -
Acco05g1968 800 Gene3D - 17 145 IPR036426 -
Acco05g1968 800 ProSiteProfiles Protein kinase domain profile. 511 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1968 800 Pfam Protein kinase domain 515 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1968 800 Pfam S-locus glycoprotein domain 243 313 IPR000858 GO:0048544
Acco05g1968 800 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Acco05g1968 800 SMART ntp_6 334 412 IPR003609 -
Acco05g1968 800 ProSiteProfiles Bulb-type lectin domain profile. 26 145 IPR001480 -
Acco05g1968 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Acco05g1968 800 ProSiteProfiles PAN/Apple domain profile. 331 413 IPR003609 -
Acco05g1968 800 SMART blect_4 32 147 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1968 Acco-ChrAcco05 36053023 36055425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1968 406 792 Receptor kinase-like Gene Family AT5G45780 34.848 3.28e-66 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Acco05g1968 Pkinase 1.9e-51 CL0016