Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1964 ATGGCTCATCCTCAGCATCAACTAGATAACCCCAGGTTCCATTTGGATGCCCTGTACTGTTCGGAAGAGCATTGGGAGGAACATTCCGGCGCCGATTATTCCCACCACGAATTAGAACTTGTCGACGAGTCTTATCTTGGCTGTGATGCTCCGACAAAGTTGTTTCCGGTGTTTCTGGAACAGGACCTATCGTGGGAAGATGAGGAGCTGACTTCTCTGCTGGCAAAAGAACGTGAAAACCAACTCTATACGTTACTGGAAACCAACCCTGTTCTCGCTGGCGCTCGCAGAGAAGGCGTTGAGTGGATTCTGAAAGTGAATGCCCACTACTCTTTCTCTGTTCTCACTGCCGTTCTCGCCGTCAACTACCTCGACAGGTTTCTGTTCCACTTTCAAGTTCAGGACGGAAAGCCTTGGATGACCCATCTCGCCGCCGTCGCTTGTCTTTCCCTTGCCGCCAAGGTGGAGGAGGCCCATGTCCCTCTTTTACTCGACCTCCAGGTGGAAGATAGCAAATACGTGTTCGAAGCCAAAACCATAAAAAGGATGGAGATTTTGGTGCTTTCCACTCTTGAGTGGAAGATGAATCCGGTGACACCACTATCGTTCCTTGATTACATCACTCGGAGGCTGGGCTTAAGGGACTATCTCTGCTGGGAGTTCCTCAGGAGGTGCCAAGGCATTATTCTGTCTGTCATTACAGATTCAGGGTTTATGTGTTATCTTCCTTCCGTGGTAGCAACGGCGACAATGATGCACGTAGTCAATGGTGTGGAAGCCGGCCTTGGAATTGAGTACAGAAACCAGCTGCTGGGTATTCTGGGTATCGACAAGGACAAGGTAGGCGAGTGTCACAAGCTTATAGTGGAATTTACAGCAGAGTGGAGGGTGAAGCAATCCAACAAACGCACGTTTGGTTCCGTTCCCGGAAGTCCAAACGGTGTGATGGATGCGTCGTTTAGCTGCGACAGCTCCAACGATTCGTGGGCCGTGACAGCGTCTGTGTCGTCCTCGCCGGAGCCTCTCTCAAAGAAGGCCAGGACTCAAGATCAGCTTCTTCTAAGCCATCCCAATTCAGAATTCCCCACTCCCTTCATCTAA 1101 0.5059 MAHPQHQLDNPRFHLDALYCSEEHWEEHSGADYSHHELELVDESYLGCDAPTKLFPVFLEQDLSWEDEELTSLLAKERENQLYTLLETNPVLAGARREGVEWILKVNAHYSFSVLTAVLAVNYLDRFLFHFQVQDGKPWMTHLAAVACLSLAAKVEEAHVPLLLDLQVEDSKYVFEAKTIKRMEILVLSTLEWKMNPVTPLSFLDYITRRLGLRDYLCWEFLRRCQGIILSVITDSGFMCYLPSVVATATMMHVVNGVEAGLGIEYRNQLLGILGIDKDKVGECHKLIVEFTAEWRVKQSNKRTFGSVPGSPNGVMDASFSCDSSNDSWAVTASVSSSPEPLSKKARTQDQLLLSHPNSEFPTPFI 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1964 366 Pfam Cyclin, N-terminal domain 92 196 IPR006671 -
Acco05g1964 366 SMART Cyclin_C_2 198 324 IPR004367 -
Acco05g1964 366 SUPERFAMILY Cyclin-like 65 196 IPR036915 -
Acco05g1964 366 Gene3D - 87 196 - -
Acco05g1964 366 CDD CYCLIN_AtCycD-like_rpt1 95 193 - -
Acco05g1964 366 CDD CYCLIN_AtCycD-like_rpt2 198 288 - -
Acco05g1964 366 FunFam D6-type cyclin 79 196 - -
Acco05g1964 366 SUPERFAMILY Cyclin-like 181 296 IPR036915 -
Acco05g1964 366 Gene3D - 197 286 - -
Acco05g1964 366 Pfam Cyclin, C-terminal domain 198 305 IPR004367 -
Acco05g1964 366 PANTHER CYCLINS 77 293 IPR039361 -
Acco05g1964 366 SMART cyclin_7 101 189 IPR013763 -
Acco05g1964 366 FunFam CYCLIN D32 197 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1964 Acco-ChrAcco05 35986247 35987640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1964 13 303 Core Cell Cycle Gene Families AT4G34160 50.338 8.60e-94 283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1964 05 35986247 35987640 Acco11g2091 11 34941694 34944572 ECH
Acco05g1964 05 35986247 35987640 Acco12g1923 12 30719068 30723858 ECH
Acco05g1964 05 35986247 35987640 Acco05g1964 05 35986247 35987640 ECH