Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1957 ATGACCCCCGAAGCTGCAGAGAGCTTGAGAAATTCCCAGAGCCCTGAGAAGGCTTCCATGGAGAAACCAATCCAAGTCAAAGGTCATCCACGGAACCTTCCAAGTTCCATGGTTCTGCCACGGAACTTGGAAGGTTCTCCACCTGAACGTCATGCATGGTGTTGGTGGTGGTGTGCCGCCGAAATGGTGAGGGCGACGGAGTTGGAGACTTGTAGTCTTGACAGTGTGGGGGGCGACGAAATTCAACCCTATGATTATTCTCCGATCACATTCTCCTCCTCTATAACCATTGAAAGAAGTAAAAGGGTCAGTTCAAGTGAACAGGGAAAAAAAAAAGAAGAAAAGAAAAAAGAGGATTGCGAGTTTGTTTTTGCTTCTACCATTCATGCTCTTGGATTAATGGCTGTGGAGCTTATATCGGGTTATGGGGATGATAGTTTTGCAGGCAGGACGGAACTAGACAACACAATCGCGGTGCAGGAAGCTACAGCCGCCGGCATTCACAGCGTCGAGAAGCTCATGACAATAATTACTCAGCACCGAGAGGAGGCGGCTTCCGGCTCCCGAGGAGAACCTTCGGAACTGGAAGTTCTGGCAGATACGGCGATGAACAAGTTCAAAAGGGTTATTTCCCTGTTGGACCGGCCAAGAGTTGGCCACGCTCGTTTCAGAAAAGCTCCTCCGACGACGCAGGCTTCGATTCCTTTCCTCCAGCCGCAGCAGACGTCGGATTCTGAAACCCCAGTGCCTCCTGTTACAGAACACCAACACAACAAAACAGAGCAACCCTCTGCTTTTAAGGTTTATTGCCCCACTCCAGTTTTACGTCTTCCGCCTCTGCCTCACCAGGCGCACCAACCTTTGCCCTTTCATCGTGTGGAGAAGAAGGAGGCCAACGGAAGTGTCCAATTTTCGGCGTCGCCGCCAGTATCCGCAGCCAATTCGTACATGTCCGCGTTGACAGGGGATACTGATAGTATACAACGTTCTTGTCATTCTTCGGGGTTCCAAATCATTCACAGTCAGAGATCACAACAGGGATCTTACATGGGCAAGCCACCATTGTGTTCGAGTTCTTTAAAGAGGAAGTGCAATTCAATGGACGATGCCGGTCTCAAGTGTGGATCATCTTCTGGTCGCTGCCATTGCTCCAAGAAAAGGAAATCAAAGGTAAGGAGAGTGGTCAGAGTTCCAGCAATCAGCTCGAAGATGGCTGATATTCCAGCGGATGAATATTCGTGGAGAAAATATGGACAAAAACCCATTAAGGGTTCTCCTCACCCCAGGGGTTATTACAAGTGTAGTAGTGTGAGAGGCTGCCCAGCACGCAAACACGTGGAGCGTGCTCTGGATGATCCAACCATGCTTATTGTCACCTACGAAGCTGATCATAATCACTCCCTGGAGGTTGCAGCCGCCGTAGTCCTCGAATCATCCTAG 1440 0.4986 MTPEAAESLRNSQSPEKASMEKPIQVKGHPRNLPSSMVLPRNLEGSPPERHAWCWWWCAAEMVRATELETCSLDSVGGDEIQPYDYSPITFSSSITIERSKRVSSSEQGKKKEEKKKEDCEFVFASTIHALGLMAVELISGYGDDSFAGRTELDNTIAVQEATAAGIHSVEKLMTIITQHREEAASGSRGEPSELEVLADTAMNKFKRVISLLDRPRVGHARFRKAPPTTQASIPFLQPQQTSDSETPVPPVTEHQHNKTEQPSAFKVYCPTPVLRLPPLPHQAHQPLPFHRVEKKEANGSVQFSASPPVSAANSYMSALTGDTDSIQRSCHSSGFQIIHSQRSQQGSYMGKPPLCSSSLKRKCNSMDDAGLKCGSSSGRCHCSKKRKSKVRRVVRVPAISSKMADIPADEYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPTMLIVTYEADHNHSLEVAAAVVLESS 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1957 479 ProSiteProfiles WRKY domain profile. 403 469 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g1957 479 SMART WRKY_cls 408 468 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g1957 479 MobiDBLite consensus disorder prediction 223 262 - -
Acco05g1957 479 Gene3D WRKY domain 390 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g1957 479 Pfam Plant zinc cluster domain 361 406 IPR018872 -
Acco05g1957 479 MobiDBLite consensus disorder prediction 231 262 - -
Acco05g1957 479 FunFam WRKY transcription factor 65 392 469 - -
Acco05g1957 479 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 159 469 IPR044810 GO:0003700
Acco05g1957 479 Pfam WRKY DNA -binding domain 410 466 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g1957 479 SUPERFAMILY WRKY DNA-binding domain 406 467 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g1957 479 MobiDBLite consensus disorder prediction 1 19 - -
Acco05g1957 479 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1957 Acco-ChrAcco05 35929870 35932231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1957 134 429 WRKY Transcription Factor Family AT4G24240 45.652 1.49e-72 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco05g1957 WRKY 5.1e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1957 05 35929870 35932231 Acco05g1957 05 35929870 35932231 ECH