Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1955 ATGAACAGGGTTCCTCCAAAAATTCTAGTTTCAACTTTGTACCTCATATTGTTCTTTACTGTCGAAACTCTAGCGCATGTTGCTGATACAGACAACAGTCATAGTGGTGAAGGTGAGGTTTTCAGCAAAAGTTGCCACAATGAATTCCCCTCAATACCCTTCTCTTCCTCATGTCAAAAATCAAAAAGCACTGAAGCATCTCAAGGTTTACCTCTCCAAACAGATGGTTTGGTATTTGCAGATCAGAGACTTGAAGTTGTATACCCAGCGATCCAAAAATTCAAGTCCAGCATCACTTTTGATCCATTAGGCGTCACCAAATCATGGGTTGGTTCTGATATTTGCAGCTACAAAGGTTTCCACTGTGATAACCCCCCAGATAACACTTCAGCCATTGCTATGGCCTCCATTGATTTCAATGGATTTCAACTTGGAGCTCCAACACTGGATGGCTTCATCGATCAGCTTCCTGATATTGCTCTGTTCCATGCAAATTCCAACAATTTTAGAGGCACCATCTCCACCAAAATCTCCAAGCTCCCTTATCTTTATGAGCTTGATGTTAGCAACAATCAGCTATCTGGTCCATTTCCCATGGCTGTGTTGGGCATCAACACCCTAACATTCTTGGACCTTCGCTTCAATTTGTTCTCTGGGCAAGTCCCTCCTCAGATATTCACCCAGAATCTCGATGTCCTCTTCATCAACAACAATGACTTCACTCAGAGCTTGCCTGATAACCTAGGAAGCACTCATATTCTTTATCTCACCTTAGCCAACAACAAATTCATGGGCCCTATACCTAGAAGCCTCCCTAAAGCTTTGTCCACTCTCACTGAGGTGCTATTCCTGAACAACCAGTTAACAGGTTGTATCCCGTATGAGATCGGGTTACTTAAAGAGGCTAGAGTGTTTGATGCCGGGAACAACCAGTTGACAGGTCCATTGCCTATGTCTTTGGGTTGCCTTGAGCAGTTGCAACTTCTCAATTTGGCTGGTAATCTTCTGTATGGTATGGTACCAGAAGTGGTGTGTGGACTAGAGAATTTGGTCACTTTGTCACTTTCAGACAATTATTTCACAAACATAGGACCTTTGTGTAGGAGCTTAATTCAGCGAGGGGTTCTTGATATTAGGAACAATTGCATTCCTGATATTCCATTCCAGAGATCAATGATTGAGTGTGTAGATTTCTTTGTGCACCCCAGATTTTGTTCCCACATGTGGTTTCATAGTTTCATTCCTTGTAAGTTTTCTTTCCACAAGTCTCCAGTCTCTGCCATACCTAAGATAGCTCCTTCTTCTCCCTGA 1311 0.4272 MNRVPPKILVSTLYLILFFTVETLAHVADTDNSHSGEGEVFSKSCHNEFPSIPFSSSCQKSKSTEASQGLPLQTDGLVFADQRLEVVYPAIQKFKSSITFDPLGVTKSWVGSDICSYKGFHCDNPPDNTSAIAMASIDFNGFQLGAPTLDGFIDQLPDIALFHANSNNFRGTISTKISKLPYLYELDVSNNQLSGPFPMAVLGINTLTFLDLRFNLFSGQVPPQIFTQNLDVLFINNNDFTQSLPDNLGSTHILYLTLANNKFMGPIPRSLPKALSTLTEVLFLNNQLTGCIPYEIGLLKEARVFDAGNNQLTGPLPMSLGCLEQLQLLNLAGNLLYGMVPEVVCGLENLVTLSLSDNYFTNIGPLCRSLIQRGVLDIRNNCIPDIPFQRSMIECVDFFVHPRFCSHMWFHSFIPCKFSFHKSPVSAIPKIAPSSP 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1955 436 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 49 418 - -
Acco05g1955 436 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 273 363 - -
Acco05g1955 436 SUPERFAMILY L domain-like 94 383 - -
Acco05g1955 436 Gene3D Ribonuclease Inhibitor 89 251 IPR032675 -
Acco05g1955 436 ProSiteProfiles Leucine-rich repeat profile. 349 370 IPR001611 GO:0005515
Acco05g1955 436 Pfam Leucine rich repeat N-terminal domain 90 123 IPR013210 -
Acco05g1955 436 Gene3D Ribonuclease Inhibitor 252 398 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1955 Acco-ChrAcco05 35909351 35910661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1955 77 402 Leucine-rich Repeat extension Gene Families AT3G24480 43.252 7.50e-85 266