Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1947 ATGGAAGAAAGAGAGTGTTGTTCGAGGGATTCAACGATCACAACGAGCAGAAGCAGCCCGCCGGAGAAGCCGCGGAAGCAGCAGAGGCAGAAAGCGGCGGCGAAGGACAAACCATACAGGGGGATAAGGATGAGGAAGTGGGGCAAGTGGGTGGCTGAGATCAGAGAACCAAACAAGAGGTCAAGGATTTGGCTTGGTTCTTACACCACACCCATCGCCGCCGCACGCGCTTACGACACCGCCGTTTATTACCTGCGAGGTCCTTCTGCCTCCCTCAACTTCCCCGAACAGTTGTTCCAAGACGGCGGCGACGCCCTCACCCGCGGTGACTTGTCCGCCGATTACATTCGTAAGAAAGCCACCGAAGTCGGCGCAAGAGTTGACGCCCTCCAAACTGCCCTTCACGCCGCCTCCTCCTCTCCCTCCACCAGTTCTACCCAAACCACCTCCCAAAAACCCGACTTGAATGAGTACCCGCAACCCGAAGAAGACTCCGTCGAGGATTAG 507 0.572 MEERECCSRDSTITTSRSSPPEKPRKQQRQKAAAKDKPYRGIRMRKWGKWVAEIREPNKRSRIWLGSYTTPIAAARAYDTAVYYLRGPSASLNFPEQLFQDGGDALTRGDLSADYIRKKATEVGARVDALQTALHAASSSPSTSSTQTTSQKPDLNEYPQPEEDSVED 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1947 168 SUPERFAMILY DNA-binding domain 38 96 IPR016177 GO:0003677
Acco05g1947 168 ProSiteProfiles AP2/ERF domain profile. 38 95 IPR001471 GO:0003700|GO:0006355
Acco05g1947 168 FunFam Ethylene-responsive transcription factor 2 37 96 - -
Acco05g1947 168 MobiDBLite consensus disorder prediction 134 156 - -
Acco05g1947 168 MobiDBLite consensus disorder prediction 22 38 - -
Acco05g1947 168 PRINTS Ethylene responsive element binding protein signature 77 97 IPR001471 GO:0003700|GO:0006355
Acco05g1947 168 PRINTS Ethylene responsive element binding protein signature 39 50 IPR001471 GO:0003700|GO:0006355
Acco05g1947 168 MobiDBLite consensus disorder prediction 134 168 - -
Acco05g1947 168 MobiDBLite consensus disorder prediction 1 38 - -
Acco05g1947 168 SMART rav1_2 38 101 IPR001471 GO:0003700|GO:0006355
Acco05g1947 168 Gene3D AP2/ERF domain 38 97 IPR036955 GO:0003700|GO:0006355
Acco05g1947 168 Pfam AP2 domain 39 87 IPR001471 GO:0003700|GO:0006355
Acco05g1947 168 CDD AP2 39 97 IPR001471 GO:0003700|GO:0006355
Acco05g1947 168 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 21 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1947 Acco-ChrAcco05 35838576 35839082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1947 37 168 AP2-EREBP Transcription Factor Family AT2G23340 57.534 2.74e-50 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco05g1947 AP2 1.8e-11 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1947 05 35838576 35839082 Acco05g1947 05 35838576 35839082 ECH