Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1946 ATGAGAGAGGTGCGTAGCCTCAATTTGTCGACCATGGGAAGCATGAAGGTTCATCACTTGGCACGTGCACTGTGGGAACACGATCCCTCCCCCTCCCTCGGCTGCAAACGCCTCCGCCCCCTCGCCCCCAAGCTCCCCTCCTCCCCCACCACCCCTTTCGACCTCAAGACCTTCATCCGCCCCGAAAGTGGCCCCCGCAAACTCTCCGACGATCCTCCCAGAGACCCACCCCAGGTGGAAACGCATCCGGGAGGGACGAGGTGGAATCCGACGCAGGAGCAGATAGGGATATTGGAGATGCTGTACCGAGGTGGGATGAGAACCCCGAACGCTCAGCAGATAGAGCAGATCACGGCTCAGCTAGCCAAGTATGGCAAGATTGAGGGCAAGAATGTGTTCTATTGGTTCCAAAACCACAAAGCACGCGAGAGACAGAAGCAGAAACGAAACAGTCTTCGCCTCTCTCAAAGTCCCAGATCCACTACTACTTCTGCGATCACTTTTGACGCAACCCTGGGTGAAGTAATAGGCACAGAGGAGGATAGTCCGTACAAGAAGAAGTGTAGGGGTTGGACATTTCAAGAACAAAGTGGGTCGTGTAATAAAGAGCGACAACATACAACTCTAGAGCTTTTCCCGTTGCACCCGGAAGGCAGATGA 660 0.547 MREVRSLNLSTMGSMKVHHLARALWEHDPSPSLGCKRLRPLAPKLPSSPTTPFDLKTFIRPESGPRKLSDDPPRDPPQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLAKYGKIEGKNVFYWFQNHKARERQKQKRNSLRLSQSPRSTTTSAITFDATLGEVIGTEEDSPYKKKCRGWTFQEQSGSCNKERQHTTLELFPLHPEGR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1946 219 Gene3D - 85 153 - -
Acco05g1946 219 Pfam Homeodomain 86 145 IPR001356 GO:0003677
Acco05g1946 219 FunFam WUSCHEL-related homeobox 4 85 152 - -
Acco05g1946 219 SMART HOX_1 83 150 IPR001356 GO:0003677
Acco05g1946 219 PANTHER WUSCHEL-RELATED HOMEOBOX 4 15 219 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Acco05g1946 219 MobiDBLite consensus disorder prediction 60 77 - -
Acco05g1946 219 MobiDBLite consensus disorder prediction 38 91 - -
Acco05g1946 219 SUPERFAMILY Homeodomain-like 81 151 IPR009057 -
Acco05g1946 219 CDD homeodomain 86 147 IPR001356 GO:0003677
Acco05g1946 219 ProSiteProfiles 'Homeobox' domain profile. 81 146 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1946 Acco-ChrAcco05 35816371 35817247 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1946 15 172 Wox Gene Family AT1G46480 62.712 6.22e-65 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Acco05g1946 Homeodomain 5.1e-19 CL0123