Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1940 ATGAATCCACAGCCTGCTGTCCGACGTATCTCTGAATGCTTCATCAAACCACCCCTTCTTCCCAATGACTCTAACCCCATCTGCGATTTATCTCCCGCCGACATTCTTATGTTGTCCGCTCACTATATCCAGAAAGGACTCCTCTTCCTCAAGCCTTCTCCACGCAATTCTCCCGTTTTCATTGATTCTCTTCTCCGCCGCCTCAAGCGCTCTCTTTCTCTCACCCTCCTCCATTTTTATCCCCTAGCCGGCCGCCTCGTTACCACACGTCTTCCCTCCTACTCCATCTACGTCGATTGCGTCAACAGTGACGGCGCTAGATTTATCTACGCCACTTTAGAAATGACCGTCTCCGACATCCTCTCCCCCGTCGATGTCCCCTCCGTCGCCCAATCATTCTTTGACCATGACAGGGCAGTCAACCACGACGGGCACACCTTGCCTTTGTTGTCCATCCAGGTCACCGAACTGATAGACGGCGTTTTCATTGGCTGTTCCATGAACCACTGCCTCGCCGACGGCACTTCCTACTGGAAATTCTTCAACGCCTGGTCCGAAATCTTTCGAGCACTAGAAGGCGATAAGTTTGATAGTGACGGTGTTTGCATTCCCACCATCTCACATCCCCCCATTCACGATCGTTGGTTCCCAGATGGTTGTGGTCCCCGTATCCCTCTTCCCTTCAAACATCATGACGAGTTCATAAGCAGATTAAACCCTCCCCCTCTCAGAGAGAGAATATTCCATTTCACAACAGAAACTATTGCGAAACTGAAAGCAAGGGCCAACCAAGGGTCCAACACCACCAAGATATCATCCTTCCAATCATTATCGGCGCTCGTCTGGAGGTGCATAACACGCGCCCGGAGTCTCCCCCGTGATCAGAGAACAACCTGCAGGTTGGCGGCAAATAACAGATCAAGAATGGAACCTTCGCTTCCTGAAGAGTACTTTGGCAATTCAATCCATGCGGTGGCTACGGATGAAACGAAGTCTGGGGAGTTGTTAGAGCACGACCTTGGATGGGCGGCGGGGAAGATACACGTGGCTGTTGCCAACCACGACGATAAAGCAGTGCGTGAGTTTATGAAGAAGTGGTTGGAGAGCCCGTTCGTATCTCAACCGGGTCGGATGTTTGACCCGTACAGCGTGATGATGGGGAGCTCGCCCAGATTCAACATGTATGGGAATGAGTTTGGAATGGGGAAAGCGCTGGGTGTTCGAAGTGGGTATGCCAACAAGTTTGATGGCAAAGTGACGTCATATCCTGGGCGTGAAGGTGGTGGAAGCGTTGACTTAGAGATCTGTCTTCCGCCGGCGTTTATGACGGCGCTGGAATCCGACGACGAGTTCTTGAATTATGTATCTGCGCAAACCTTTTCGGCGTTTTAA 1392 0.5136 MNPQPAVRRISECFIKPPLLPNDSNPICDLSPADILMLSAHYIQKGLLFLKPSPRNSPVFIDSLLRRLKRSLSLTLLHFYPLAGRLVTTRLPSYSIYVDCVNSDGARFIYATLEMTVSDILSPVDVPSVAQSFFDHDRAVNHDGHTLPLLSIQVTELIDGVFIGCSMNHCLADGTSYWKFFNAWSEIFRALEGDKFDSDGVCIPTISHPPIHDRWFPDGCGPRIPLPFKHHDEFISRLNPPPLRERIFHFTTETIAKLKARANQGSNTTKISSFQSLSALVWRCITRARSLPRDQRTTCRLAANNRSRMEPSLPEEYFGNSIHAVATDETKSGELLEHDLGWAAGKIHVAVANHDDKAVREFMKKWLESPFVSQPGRMFDPYSVMMGSSPRFNMYGNEFGMGKALGVRSGYANKFDGKVTSYPGREGGGSVDLEICLPPAFMTALESDDEFLNYVSAQTFSAF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1940 463 Gene3D - 232 447 IPR023213 -
Acco05g1940 463 Gene3D - 9 220 IPR023213 -
Acco05g1940 463 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 10 452 - -
Acco05g1940 463 Pfam Transferase family 28 451 - -
Acco05g1940 463 FunFam Tryptamine hydroxycinnamoyl transferase 229 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1940 Acco-ChrAcco05 35756492 35757883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1940 21 446 Monolignol Biosynthesis Gene Families AT5G48930 29.120 8.14e-42 152