Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1937 ATGACGAACTACGCGTTTCTGAACGATGAGCTCTCAAAGCATACCTCAATTTTTGGGTTACGGCTGTGGGTGGTGCTGGGAATATGCGTCGGAGCAGCCATTGTCATTTTACTGTTTATCATATCATTATGGTTCGTTGCTAAGCGCAATAATGCTTCAAAGCTCAAGTCTTGTCCGAAACCCACCAACATCAACATACCAAATGTGTCCAAGGAGATTCAGGAAATCCGGATTGACCATCCTCGTGAACCAACCAAGCCAAACCTTGTGCCCGACCCCGACCCGTTTCCGGAATCACAGTCCGAGGCTCTAGATAGAGCCCAAGCCATTCTTCTTCAGCAGGAAGACGAAAGCCCAGCAACAGGGCCCCACAAAATTCACATTGAAATCGGAAAGGGCCACCGGATTTCGTATCCTGAGAGGGCTGGTGGTTCGTCGCATGGCAGCGGGGAGGTTCGGTCCGGTGAGCAACCCTCCATTTCTGTGCCGGAAGTTTCTCATTTGGGTTGGGGCCATTGGTACACTCTTCGAGAGCTTGAGGTCTCCACCAATTTTTTCGCCGATGAGAATGTCATAGGTGAAGGTGGCTACGGAATTGTTTACCGAGGGGTGTTGCAAGATAATACCAATGTTGCTGTTAAAAATTTGCTCAACAATAAGGGTCAAGCTGAGAGGGAATTCAAGGTGGAAGTTCAAGCAATTGGACGCGTTCGGCATAAAAATTTGGTGAGGCTGCTTGGATATTGTGTTGAAGGAGCTCATAGGATGCTTGTTTATGAGTATGTGGACAATGGAAATCTAGAACAGTGGCTACATGGAGATACCAACCCTTCGAGCCCCCTGACGTGGGATATCCGAATGAATATAATACTTGGAACTGCTAAAGGGTTGACATACCTTCATGAGGGGCTTGAGCCGAAGGTTGTTCATCGTGATATCAAGTCGAGCAATATATTGCTTGATAAGCGATGGAATCCGAAAGTTTCTGATTTTGGGCTTGCTAAACTTCTGGGATCCGAAAGGAGTTATGTGACGACTCGCGTGATGGGAACATTTGGATATGTGGCGCCAGAATATGCTAGCACTGGCATGTTGAACGAAAGAAGCGATGTGTATAGCTTTGGAGTTCTTCTTATGGAGATAATTTCTGGTAGGAACCCAGTTGATTATAGCCGTCCTCCTGGAGAGGTGAACCTGGCTGAGTGGCTGAAGACGATGGTTACCAACCGAAATGCAGAAGGTGTACTGGATCCTAAACTACCTGAAAAACCTTCTTCTAGAGCACTGAAGCGTGCCTTATTAGTAGCTTTACGGTGTGTGGATCCAAATGTCCAGAAAAGGCCAAAGATGGGACATGTTATACATATGCTCGAAGCTGATGAGTTCCCATTTCGAGATGACCGTAGAGCTGGAAGGGAATATGGACGGCCCCATCAGGATAACATGAGAGATAGGTTGATGGAAAAGCGAGTAAGCGAATCTGCTGAAAGCAATGCGTATGAAAGTAGTTCCCACACTAAATAG 1524 0.4678 MTNYAFLNDELSKHTSIFGLRLWVVLGICVGAAIVILLFIISLWFVAKRNNASKLKSCPKPTNINIPNVSKEIQEIRIDHPREPTKPNLVPDPDPFPESQSEALDRAQAILLQQEDESPATGPHKIHIEIGKGHRISYPERAGGSSHGSGEVRSGEQPSISVPEVSHLGWGHWYTLRELEVSTNFFADENVIGEGGYGIVYRGVLQDNTNVAVKNLLNNKGQAEREFKVEVQAIGRVRHKNLVRLLGYCVEGAHRMLVYEYVDNGNLEQWLHGDTNPSSPLTWDIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKRWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGVLLMEIISGRNPVDYSRPPGEVNLAEWLKTMVTNRNAEGVLDPKLPEKPSSRALKRALLVALRCVDPNVQKRPKMGHVIHMLEADEFPFRDDRRAGREYGRPHQDNMRDRLMEKRVSESAESNAYESSSHTK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1937 507 MobiDBLite consensus disorder prediction 468 495 - -
Acco05g1937 507 SUPERFAMILY Protein kinase-like (PK-like) 167 458 IPR011009 -
Acco05g1937 507 Gene3D Transferase(Phosphotransferase) domain 1 262 469 - -
Acco05g1937 507 ProSiteProfiles Protein kinase domain profile. 186 444 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1937 507 MobiDBLite consensus disorder prediction 136 160 - -
Acco05g1937 507 FunFam Putative receptor-like serine/threonine-protein kinase 262 472 - -
Acco05g1937 507 ProSitePatterns Protein kinases ATP-binding region signature. 192 214 IPR017441 GO:0005524
Acco05g1937 507 FunFam Probable serine/threonine-protein kinase At1g01540 166 261 - -
Acco05g1937 507 MobiDBLite consensus disorder prediction 468 507 - -
Acco05g1937 507 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Acco05g1937 507 SMART serkin_6 186 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1937 507 PANTHER OS01G0323000 PROTEIN 3 491 - -
Acco05g1937 507 CDD STKc_IRAK 192 458 - -
Acco05g1937 507 Gene3D Phosphorylase Kinase; domain 1 156 261 - -
Acco05g1937 507 Pfam Protein kinase domain 187 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1937 Acco-ChrAcco05 35733868 35736265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1937 131 500 Trihelix Transcription Factor Family AT1G70460 42.782 2.63e-90 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Acco05g1937 Pkinase 3.6e-47 CL0016