Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1931 ATGGCTCTGTTGTTGGACGACTGTGAGAGCATTTTACTGTCGTTAGAGTCACACAAATCAGTTCCGGCTCCATTCCTGACCAAGACATACCAGCTGGTGGATGATCCCACCACCGATCACATTGTTTCTTGGGGAGAAGACGACACCACCTTCGTCGTCTGGCGCCCTCCTGAGTTCGCCCGAGACCTCCTCCCCAACTACTTCAAGCACAACAATTTCTCCAGCTTCGTTCGCCAGCTCAACACTTACGGTTTTAGGAAGATCGTGCCAGACAGATGGGAGTTCGCGAATGAGTTTTTTAGGAAGGGAGCGAAGCACTTACTGTGCGACATCCACAGAAGAAAGACGGCTCAGCTTCATCATCACCAGCATGTGCCCGTTAATCATCCTCCTCACCATCATCATCAGCTTCCGTTGGGGCTCAACGTTCCTACCTTTTTTCCCTTCTCCAGCACCAGAATCAGCGTCTCTCCGTCCAACGACTCCGACGAGCAGCCGCCCCATTGGTGTGACTCGCCTCCGAGTTGTACGGGTGGTGGTATGGTGACGCTGTCAGAGGATAACGAAAGACTGAGAAGAAGCAACAACTTGCTCATGTCTCAGCTGGCCCACTTGAAAAAACTCTATAACGACATCATCTATTTCGTCCAGAATCATGTCAAGCCTGTCGCTCCCAGAAATTCTTTCTCTTCCTCCTCTTTTCTCCCACCTAATAATACATGTTCACCATCACCCATGCCTCCTGCTACAAACGTTTCCATGGTCCAAAGGCAAATGAACCAGCTTCTGGGTTATTATTCTACCTCTGCTAATAACCCTAAGCAAACTACCACCCCTCAACTATCCCGGTTCGTGAGACCTCCCATGACCTACACCTCAAGAAATTCAGTCTCCATTGTGGAAGAACCCTGCAGCAATAATAATAATACCAAGCTTTTTGGTGTGTCCCTTCTATCCAAGAAAAGGCTCCATCCTGATTCTGATACTATTACTCCTTCCAATCCCGAAATGAACAAGGCTCGATTGGTCTTGGAAAATGATGACGACCTGTCCTTGAATCTCATGCCCCCTTCGGCATGTTACAATTCTTAG 1092 0.4863 MALLLDDCESILLSLESHKSVPAPFLTKTYQLVDDPTTDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFRKGAKHLLCDIHRRKTAQLHHHQHVPVNHPPHHHHQLPLGLNVPTFFPFSSTRISVSPSNDSDEQPPHWCDSPPSCTGGGMVTLSEDNERLRRSNNLLMSQLAHLKKLYNDIIYFVQNHVKPVAPRNSFSSSSFLPPNNTCSPSPMPPATNVSMVQRQMNQLLGYYSTSANNPKQTTTPQLSRFVRPPMTYTSRNSVSIVEEPCSNNNNTKLFGVSLLSKKRLHPDSDTITPSNPEMNKARLVLENDDDLSLNLMPPSACYNS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1931 363 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco05g1931 363 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco05g1931 363 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco05g1931 363 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 272 IPR027725 -
Acco05g1931 363 Coils Coil 188 208 - -
Acco05g1931 363 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco05g1931 363 FunFam Heat stress transcription factor B-4 17 115 - -
Acco05g1931 363 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Acco05g1931 363 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Acco05g1931 363 Gene3D - 17 116 IPR036388 -
Acco05g1931 363 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1931 Acco-ChrAcco05 35689337 35690522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1931 9 358 HSF AT1G46264 53.930 4.45e-112 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Acco05g1931 HSF_DNA-bind 7.6e-32 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1931 05 35689337 35690522 Acco10g1722 10 30502928 30504098 CCT
Acco05g1931 05 35689337 35690522 Acco05g1931 05 35689337 35690522 ECH