Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1898 ATGTCTGCAAGGAATGAACACCAGACCGTCCCCCTTTCGGTGCTTCTGAAGCGGGAATTGGCAAACGAGAAAATTGAGAAACCAGAAATTATGCATGGTCAAGCCAGCCAGAGCAAAAAAGGCGAAGATATCACGCTAATAAAGACGGAATGCCAAAGGGCGGCGGCAGATGGGGTGTCTACTTATTCTGTTTTTGGGTTATTTGATGGGCATAATGGATCTGCTGCTGCAATTTATGCCAAGGAGAATCTATTAAATAATGTTTTAAGTGCGGTTCCCCGAGAGCTTAACAGGGAGGAGTGGGTGTCAGCATTGCCTAGGGCTTTGGTTGCAGGCTTTGTCAAAACTGATAAAGATTTCCAAGAGAAAGGACAAAAATCTGGAACAACAGCAACCTTTGTGATTATTGAAGGATGGGTTGTTACAGTTGCATCAGTTGGTGATTCCCGTTGCATACTTGAGCCTTCCGAAGGTGGGATGTATTACTTGTCAGCAGATCATAGGCTTGAAACTAATGAAGAGGAGAGGGAGCGTATAACTGCTAGCGGTGGTGAGGTTGGTCGTCTAAATACTGGTGGAGGTGCACAGGTTGGTCCTTTGAGGTGTTGGCCTGGCGGCTTGTGTCTTTCAAGATCCATTGGTGATATGGATATTGGTGAATATATTGTTCCTGTCCCTTATGTGAAGCAAGTGAAGCTGTCCACAGCTGGAGGCAGGCTTATTATCTGCAGTGATGGTGTTTGGGATGCTTTGACTGCAGAAGCAGCCATTGATTGTTGTCGTGGCATGGCAGCAGATGCTGCAGCATCCCTTCTTGTTAGAGAAGCTTTGCAACCAAAGGGACTTAGAGATGATACTACCTGCATTGTTGTTGATATATTACCAAAAGAGAAGCCACCTGCTCCTGTGCAACAACCAAAAAAGGCAGGAAAAATGTTGAAGTCAATGTTTCGAAAAAAGTCCTCTGAATCATCTTCTTGTAATGACAAAGAGTACCAGGAACCAGATGTGGTAGAGGAACTGTACGAGGAAGGATCTGCTATGCTTTCAGACAGGTTAGATACAAAATACCCGCTCCGCCGCATGTTCAAGTTGTTTGTTTGTGCGGTATGTCAAAAGGAGATCAAACCTGGAGAGGGTATTTCAATTCATGCAGGTGTAAAAGTGCGTGACTGGGATGGACCCTTTCTTTGTTTTAGTTGTCAGGAGAAGAAAGAAGCAATGGAAGGGAAAAGAACATCAGATAGACTGAGCAGTGGAAGTGGCTGA 1269 0.4492 MSARNEHQTVPLSVLLKRELANEKIEKPEIMHGQASQSKKGEDITLIKTECQRAAADGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLSAVPRELNREEWVSALPRALVAGFVKTDKDFQEKGQKSGTTATFVIIEGWVVTVASVGDSRCILEPSEGGMYYLSADHRLETNEEERERITASGGEVGRLNTGGGAQVGPLRCWPGGLCLSRSIGDMDIGEYIVPVPYVKQVKLSTAGGRLIICSDGVWDALTAEAAIDCCRGMAADAAASLLVREALQPKGLRDDTTCIVVDILPKEKPPAPVQQPKKAGKMLKSMFRKKSSESSSCNDKEYQEPDVVEELYEEGSAMLSDRLDTKYPLRRMFKLFVCAVCQKEIKPGEGISIHAGVKVRDWDGPFLCFSCQEKKEAMEGKRTSDRLSSGSG 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1898 422 SMART PP2C_SIG_2 42 293 IPR001932 -
Acco05g1898 422 Pfam Protein phosphatase 2C 54 279 IPR001932 -
Acco05g1898 422 SUPERFAMILY PP2C-like 38 293 IPR036457 -
Acco05g1898 422 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
Acco05g1898 422 SMART PP2C_4 21 291 IPR001932 -
Acco05g1898 422 CDD PP2Cc 39 293 IPR001932 -
Acco05g1898 422 PANTHER PROTEIN PHOSPHATASE 31 292 IPR015655 GO:0004722|GO:0006470
Acco05g1898 422 Gene3D - 31 299 IPR036457 -
Acco05g1898 422 FunFam probable protein phosphatase 2C 12 32 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1898 Acco-ChrAcco05 35362264 35366531 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1898 1 421 PP2C-type Phosphatase Gene Family AT1G47380 76.815 0.0 686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1898 05 35362264 35366531 Acco10g1704 10 30389493 30393808 CCT
Acco05g1898 05 35362264 35366531 Acco05g1898 05 35362264 35366531 ECH