Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1897 ATGGTGGCGCCCAAACTATCATCCTACGAGGAGAGTCGCCGCAAAAGAATGGAGGAGAACAAGAAGCGAATCGAGGCCCTCAATTTGACCCAGCTTTCTCAAGCCCTCCGAAATTCCCCTTCTCCCAAACCCTCTCCTATGAAGCACACCAAATCTCGCTCAACGGAAAAAATGATTGTTGCTGTAAGGAGGTCTGGTCGGGTCGCAAACATGGTGGCTCCTGTTTACAAAGAAGTGCTTATTGATCGTGTGGCAATACCTAGAAGGGTTTATGGGACCAAAAGAAATTTATCAAACTTCGTACACGCTTCAGAGGAGGCCAGAGAGGAAGCTTTTGAAAAAGCAGAGAAGTTACTCGCGGATTTAGAAACTGAATATCCGACATTCATAAAGTCAATGCTTCCGTCACATGTAAGCGGGGGATTTTGGCTGGGTCTTACAGTCCAGTTCTGCAAGACTCATCTTCCAAAGCGGGACGAAATGATTACTTTGATAGATGAAGAGGGGGATGAGTATCCCACGGTATATTTGGCCCGTAAAACTGGACTCAGCGGTGGATGGAAAGGTTTTGCGGTTGCTCATAACCTAGCAGATGGGGACGCATTAGTTTTTCAGCTAATCAGACCTACAGCATTTAAGGTGCACATTATTAGAGTGAAGAGTCCTACTCCTACAGAGCGCAATTAG 687 0.4629 MVAPKLSSYEESRRKRMEENKKRIEALNLTQLSQALRNSPSPKPSPMKHTKSRSTEKMIVAVRRSGRVANMVAPVYKEVLIDRVAIPRRVYGTKRNLSNFVHASEEAREEAFEKAEKLLADLETEYPTFIKSMLPSHVSGGFWLGLTVQFCKTHLPKRDEMITLIDEEGDEYPTVYLARKTGLSGGWKGFAVAHNLADGDALVFQLIRPTAFKVHIIRVKSPTPTERN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1897 228 Coils Coil 105 125 - -
Acco05g1897 228 MobiDBLite consensus disorder prediction 8 25 - -
Acco05g1897 228 SUPERFAMILY DNA-binding pseudobarrel domain 123 219 IPR015300 -
Acco05g1897 228 MobiDBLite consensus disorder prediction 26 48 - -
Acco05g1897 228 CDD B3_DNA 127 218 IPR003340 GO:0003677
Acco05g1897 228 ProSiteProfiles B3 DNA-binding domain profile. 129 220 IPR003340 GO:0003677
Acco05g1897 228 SMART B3_2 129 220 IPR003340 GO:0003677
Acco05g1897 228 Pfam B3 DNA binding domain 129 218 IPR003340 GO:0003677
Acco05g1897 228 Gene3D - 103 221 IPR015300 -
Acco05g1897 228 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 33 220 IPR044837 -
Acco05g1897 228 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1897 Acco-ChrAcco05 35355215 35357015 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1897 56 228 B3 DNA Binding Superfamily AT5G42700 58.960 6.03e-69 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Acco05g1897 B3 3.3e-15 CL0405