Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1888 ATGGAAGAGAAGAGAGAGCTGACATTGAGCAGCGATGGAGCTTTCGTGGGTCATGGAAAGTTTGGATGTACAAGTTCTCACATTTCTCAGACTGGAGAAAACAAGGATGTTGCAGCTCACAGTTTGAGCTTCGACAAGAGGTCGGAGAACTCGCGTGGTGGTGGAACTGTCATTCGCAAAGCTAAATCATTGAGTGCTCACTTCTTGATCAACATTGATGGCCTAATCAATAATGCTGCAGGAAGCTATCATCAGATGGCTTCCAACGTTAAAATTGGTTCCTCCAGCAAGGAATTAAGATATTCCCTTTCATTCACTGGCCCCGCCTCACTCTCACATGAACTCTCAGAAGTCTTGAAGCTTCCAAGCCCCAAATGCAAAGAAGCTGGTACATCTGATTCTTCTGAAGAGGATGAATCAAATTCATGCAAGTTGACAAGAATGCACATGGAACCTACCTTGCCAATACATCTGAAGTTTGAAGATGTGAAATACAAGGTTCCAGAGAAAGGTGAGAGGTCTTCTGAAGAAGGAAAGTATATTCTGCATGGGATCACTGGTTCAGTACGCCCAGGAGAGATTCTTGCTCTGATGGGACCATCAGGAGGTGGTAAAACAACATTGCTCAATATCTTAAGCGGAAGGACCAAGTTTAATGGTGGTTCTATCACTTACAATGACAAACCATATACCAAGTCATTAAAGCAGAGGATTGGATATGTAACGCAAGATGATATTGTGTTCCCTCATCTTACGGTCAAGGAAACTCTCACATATGTAGCTTTGCTCCGTCTCTCCAAGGATCTATCAATAACACAGAAAAAAGAGAGGGTTATGAATGTTTTAAGTGAACTATACCTCGAAAAATGCCAGGATACAGTAATTGGTGGCAAATTTATTAGAGGGGTTTCTGGGGGTGAGAGAAAAAGGGTCTGCATTGGCACAGAAATCCTTCTCAACCCATCACTTCTGTTCTTAGATGAGCCAACATCTGGTCTAGATTCAACCACTGCGTCAAAAATTGTTCAGATTCTTCAAAACATTGCAAAAGAGGGAAAGACAGTGGTGACAACGATACACCAGCCGTCAAGTAAACTCTTCAACATGTTTGACAAGTTGATTCTGTTGGGAAAAGGAAGCACTTTGTACTTTGGAAAAGCATCTGATGCAATGATGTATTTCTCCTCTATTGGTTGTTCTCCATTAATAGCCATGAACCCTGCAGAGTTCCTCATTGACCTTGCAAATGGCAACATGTTTGACAAATCTGTCCCATCAGAACTTGAGGATAAGTTCCAATATGGAATCAGAAGACTCAACATAAAAAACAGCATACCCTCCCCAATTGATGTACACGAGTTTCTTGTCAAGGCCTATGAAATAAGGCTTGCAGAAAGAGAGAAAGCAATGCTTCTGGAATCTGTGACTATAAGGGGAGATCAGAGTGGGGTGATGCAAGGCAGGCCATTGGTGAGGGACTTTGGAGCAACTTGGTCTCAACAATTTTGCATTCTCTTCATGAGAGGCATTAGGGAGAGGCGCCACGAGTATTTCAGCTGTCTGCGTGTAACCCAAGTGATATCAACTGCAATTATTGTTGGACTACTTTGGTGGAACCCTGGTTCTTCTTCTCTCCATGATCAGGCAGGGCTATTATTCTTCCTTTCTGTGTTCTGGGGCTTCTATCCTCTATTTACTGCTATCTTCATGTTCCCACAAGAAAGAGCAATGCTAGTGAAAGAGAGATCGATTGACATGTATAAACTCAGTGCTTACTTCTTAGCTAAGAACACCAGTGATGTCCCAATGGAGCTTCTGATGCCTCCAGTGTTCATGTTGATTGTTTATTTCATGGTTGGCTTGAAGCTGCAATTTTCTGCATTTTCCCTCACCGTCCTCACAATTTTTCTCAGTGTTCTCGCAGCTCAGGGTCTTGGACAAACCTTAAGTGCAGCATTTCTGGATGTGAAGAAAGCTACAACACTAGCTTCAATCGTTGTCATGACCTTCATGCTAACTGGTGGATTCTTTAGCCAACAAGTGCCAAGGTTTATGTCATGGGTTCGCTACCTCTCTTTCAACTACCACACTTACAGGTTGCTTTTGAAAATCCAGTATGGATGTGTGGATTCAACTTCTGTATCAGGTTGCAGTGAGTCTCATTTAGTGAAAAATAATAGTGAGACTAAATTCGGGAGAGAACTGGAAGTTGTTGCTATGATAATAATGATTTTTGCTTATCGGCTAATAGCGTATTTATGTCTAAGGAGAATGGAAATAAGGACTAATTAA 2292 0.4202 MEEKRELTLSSDGAFVGHGKFGCTSSHISQTGENKDVAAHSLSFDKRSENSRGGGTVIRKAKSLSAHFLINIDGLINNAAGSYHQMASNVKIGSSSKELRYSLSFTGPASLSHELSEVLKLPSPKCKEAGTSDSSEEDESNSCKLTRMHMEPTLPIHLKFEDVKYKVPEKGERSSEEGKYILHGITGSVRPGEILALMGPSGGGKTTLLNILSGRTKFNGGSITYNDKPYTKSLKQRIGYVTQDDIVFPHLTVKETLTYVALLRLSKDLSITQKKERVMNVLSELYLEKCQDTVIGGKFIRGVSGGERKRVCIGTEILLNPSLLFLDEPTSGLDSTTASKIVQILQNIAKEGKTVVTTIHQPSSKLFNMFDKLILLGKGSTLYFGKASDAMMYFSSIGCSPLIAMNPAEFLIDLANGNMFDKSVPSELEDKFQYGIRRLNIKNSIPSPIDVHEFLVKAYEIRLAEREKAMLLESVTIRGDQSGVMQGRPLVRDFGATWSQQFCILFMRGIRERRHEYFSCLRVTQVISTAIIVGLLWWNPGSSSLHDQAGLLFFLSVFWGFYPLFTAIFMFPQERAMLVKERSIDMYKLSAYFLAKNTSDVPMELLMPPVFMLIVYFMVGLKLQFSAFSLTVLTIFLSVLAAQGLGQTLSAAFLDVKKATTLASIVVMTFMLTGGFFSQQVPRFMSWVRYLSFNYHTYRLLLKIQYGCVDSTSVSGCSESHLVKNNSETKFGRELEVVAMIIMIFAYRLIAYLCLRRMEIRTN 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1888 763 Gene3D - 157 396 IPR027417 -
Acco05g1888 763 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 133 752 - -
Acco05g1888 763 CDD ABCG_EPDR 155 385 - -
Acco05g1888 763 FunFam ABC transporter G family member 22 169 397 - -
Acco05g1888 763 Pfam ABC-2 type transporter 360 423 IPR043926 GO:0140359
Acco05g1888 763 ProSitePatterns ABC transporters family signature. 303 317 IPR017871 GO:0005524|GO:0016887
Acco05g1888 763 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 158 403 IPR003439 GO:0005524
Acco05g1888 763 Pfam ABC-2 type transporter 500 706 IPR013525 GO:0016020|GO:0140359
Acco05g1888 763 Pfam ABC transporter 182 331 IPR003439 GO:0005524
Acco05g1888 763 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 391 IPR027417 -
Acco05g1888 763 SMART AAA_5 191 380 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1888 Acco-ChrAcco05 35294788 35298074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1888 181 449 Calmodulin-binding Proteins AT2G36910 27.372 7.84e-15 77.0