Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1874 ATGGACAAGGTCAACATAAGAGAGTGGGAAAGTAGGCTTATCAATGAGCTACTACAAGGCAGGGAGCTGGCGAGGCAACTCCAGATGTGCCTCCACGCGCCGTCGTCTTCCCACGAAACCCGCGAGTACTTGATCCAGAGCATCATAGCCGCATTTGAAAGGGCACTCGCTACGGTAAACTTCCATGGTGGATCGTCGTCGGTGGGTGACCCGTCAAACCCCGCTCGGGTTGGACTCCCAACTTCTGAGTCACCACCTTTTAGTGGTAGTCCTCGCAGCGAAGACTCTGACAGAGATTTCCAAGACCAGAATGCCTCCAAAAAGAGAAGGAGCATGCCAAGGTGGACAAAGAAGATCAGAGTTAGCCCAGGGATGGCAGTGGAAGGCACTCTTGACGATGGATATAGCTGGAGAAAATATGGCCAGAAAGATATTCTGGGGGCCAAGTTTCCCAGAGGCTATTACAGATGCACCCATAGAAATGTTCAGGGGTGCTTGGCCACGAAGCAGGTGCAAAGATCTGATGAAGACCCCAATATATTTGAAATCACCTACAGAGGGAAGCACACCTGTGCACAGTCCTCATCCAATGCGGTTCCTCCATCTGGCACTCAAGAAACCCATGAACTGAATCATCCAAACGCTGCAGATCCTCATCAGGAACAGCTACTTGCCAACCTTCGAGCTGGCCTCAGAGTCCAAACCGACAACCTAGATGTCCCCAATCCAGAGCAATCACCATTTGCCTCACTTATTTTAGCTTCAACTTCCTCCACTTTGAGTCACCAAAACCAAATGTTTACAAGCTCCTCCATGTTGGAAAACAATTTTGCCGAAAACCTTACTTCTTCTTATCCTTCCTATATGTCCCCAGCCACATCAGCAATTACCTACTTTTCAGCCAATAACATGTCCTTGGCTGAGATGCCAAATATGGCGACTTCTGGGTCTGAGATCAACGACACAATCTCAGCCGTTACTTCCGCCGCAAACTCCCCAACCGTTGGTTTAGACCTCCCTTTTGATCAGTTCGGATTTGATGGACACAACTTCACCTTTGATAACCACCGATTCTTCTAA 1080 0.4889 MDKVNIREWESRLINELLQGRELARQLQMCLHAPSSSHETREYLIQSIIAAFERALATVNFHGGSSSVGDPSNPARVGLPTSESPPFSGSPRSEDSDRDFQDQNASKKRRSMPRWTKKIRVSPGMAVEGTLDDGYSWRKYGQKDILGAKFPRGYYRCTHRNVQGCLATKQVQRSDEDPNIFEITYRGKHTCAQSSSNAVPPSGTQETHELNHPNAADPHQEQLLANLRAGLRVQTDNLDVPNPEQSPFASLILASTSSTLSHQNQMFTSSSMLENNFAENLTSSYPSYMSPATSAITYFSANNMSLAEMPNMATSGSEINDTISAVTSAANSPTVGLDLPFDQFGFDGHNFTFDNHRFF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1874 359 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 11 303 IPR044810 GO:0003700
Acco05g1874 359 MobiDBLite consensus disorder prediction 191 215 - -
Acco05g1874 359 FunFam WRKY transcription factor 53 117 194 - -
Acco05g1874 359 SUPERFAMILY WRKY DNA-binding domain 129 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g1874 359 Gene3D WRKY domain 121 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g1874 359 MobiDBLite consensus disorder prediction 92 109 - -
Acco05g1874 359 MobiDBLite consensus disorder prediction 64 91 - -
Acco05g1874 359 MobiDBLite consensus disorder prediction 191 211 - -
Acco05g1874 359 MobiDBLite consensus disorder prediction 64 117 - -
Acco05g1874 359 ProSiteProfiles WRKY domain profile. 126 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g1874 359 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g1874 359 Pfam WRKY DNA -binding domain 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1874 Acco-ChrAcco05 35186529 35187797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1874 8 211 WRKY Transcription Factor Family AT5G24110 45.794 4.65e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco05g1874 WRKY 9.8e-28 CL0274