Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1866 ATGCAAATTCCGCGTTTGCAAGTAAACTTAATATGTAATCAGCGTTGGAAAGAATTAGTACTGGAGAATTATAGCATCAATATGAAATACATTTTCCTTCTCATTGTCACTTTCAAGATTATCAAGAAGAAGCTCAGCAAGCTGCAAGGGGCAATGGGATTCCAAACAGCCCATTCAAGTAAACCCACCAAAGGGCAACCTGTTACCAAACCCATTCCCTCGTCCTACGATTCATGGATGGCGAGGCATCCTTCAGGGTTGCTTTCATTTGATAGATTGATGAAAGCAGCAAATGGGAAGGACATGGTTGTGTTTTTAGACTATGATGGAACCTTATCACCCATTGTAAATGACCCTGACCGTGCTTTTATGTCTGAGGAGATGCGTGCAGCAGTGTGTGAAGTTGCTAAAAATTTCCCAACTGCAATCATTAGTGGAAGAAGCAGAGACAAGGTTAAAGACTTTGTGAAGTTAAATAATGTGTATTATGCTGGAAGTCATGGGATGGATATAATGGCACCATCAGTGCCAGCTATATCTTCTAATGGCGACCTCTATAACTTGGCCCTCGACACCACAAAGGACCATGGAGTTCCCTTTCAACCCGCGAAGAAATTCTTGCCTGCGATTCGAGAGATATTGAAACTGTTAGAGAATAAAATCAAAGGCATACAAGGTGCAAGGCTAGAGGACAATGGATTCTGCATATCTGTACACTTCCGGCAAGTTGAAGAAAAGGACTATGTTGAATTAGAAGAGAGGGTGAAGTCTGTGCTTGAAAAACATCCAGACTTTTGCTTGACTGAGGGTAAAAAGGTTCTGGAGATAAGGCCATCAATAGAATGGAACAAAGGTCATGCACTGGAATATTTTCTGGACACACTGGGATTAAGCAGTTCCAGCAATATCCTTCCGGTGTACATCGGTGATGATCGAACCGATGAAGATGCTTTTAAGGTGATACAAAAGAGAGGACAAGGCTATCCAATTATAGTGTCTTCAATTCCAAAGGAGACAAAAGCTCAGTATTCTCTGCGAGACCCATCAGAAGTGCTAATTTTCTTGTCACGTCTGGCGAAATGGAGGAAACCCATTATTGGGTCCAATTAA 1110 0.418 MQIPRLQVNLICNQRWKELVLENYSINMKYIFLLIVTFKIIKKKLSKLQGAMGFQTAHSSKPTKGQPVTKPIPSSYDSWMARHPSGLLSFDRLMKAANGKDMVVFLDYDGTLSPIVNDPDRAFMSEEMRAAVCEVAKNFPTAIISGRSRDKVKDFVKLNNVYYAGSHGMDIMAPSVPAISSNGDLYNLALDTTKDHGVPFQPAKKFLPAIREILKLLENKIKGIQGARLEDNGFCISVHFRQVEEKDYVELEERVKSVLEKHPDFCLTEGKKVLEIRPSIEWNKGHALEYFLDTLGLSSSSNILPVYIGDDRTDEDAFKVIQKRGQGYPIIVSSIPKETKAQYSLRDPSEVLIFLSRLAKWRKPIIGSN 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1866 369 Pfam Trehalose-phosphatase 105 349 IPR003337 GO:0003824|GO:0005992
Acco05g1866 369 SUPERFAMILY HAD-like 103 363 IPR036412 -
Acco05g1866 369 Gene3D - 102 183 IPR023214 -
Acco05g1866 369 Gene3D - 200 365 IPR023214 -
Acco05g1866 369 CDD HAD_TPP 103 351 - -
Acco05g1866 369 NCBIfam HAD-IIB family hydrolase 104 322 IPR006379 -
Acco05g1866 369 NCBIfam trehalose-phosphatase 100 360 IPR003337 GO:0003824|GO:0005992
Acco05g1866 369 FunFam Trehalose 6-phosphate phosphatase 208 365 - -
Acco05g1866 369 Coils Coil 241 261 - -
Acco05g1866 369 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 42 363 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1866 Acco-ChrAcco05 35107779 35110479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1866 250 359 Trehalose Biosynthesis Gene Families AT4G17770 32.479 8.36e-07 49.3