Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1864 ATGGATTGCAACAAAGATGAGGCTGTTAGGGCCAAGGAAATAGCAGAGAAAAAATTTTCAGACAGGGAATATGCTGGTGCTAAGAAGTTTGCTCTCAAGGCTCTAAATTTGTATCCTGCACTGGATGGTCTTTCACAGTTTTTGACCAACCTTGATGTTTATATCTCTGCTGAGAATAAAGTTAGTGGAGAAATGGATTGGTACGGTATACTTGGAGTGAACCCCTTTGATGATGAAGAGACGGTTAGAAAACAGTACAGGAAGCTGGCTCTTACTCTTCACCCAGATAAAAACAAGTCTTTAGGTGCAGAGGGTGCATTTAAGCTGGTTTCAGAGGCATGGAGTTTGTTGTCAGATAAAACCAAGAGACTGGAATATAACCTGAAGAGGAGTTTGAAAGGTTTTCAACATAAAACTCCCAACCATGCTGGATCTCAATCAGAAGTGCCTGGTTCAAATGGTTTTTATAATTTTAACAAGAATGTAACTTCAGATGTCAGGGCTGGAAATAGTAATGCCCAGGTGCGCCATGCCTCGATTCCTCGTCCACAGAAGAAGGCTGACACTTTTTGGACTATTTGTAATCGATGCAGGACTCATTATGAATACCTTAGGGTCTATTTGAATCATAGACTTCTATGTCCCAATTGTAACGAGGCTTTCTTGGCTGTAGAGAAGGAGCCACCTCCCAACTATTTCAAGTCAACAAATTGGTCTTCTCGCCAGCAGCATCAGAGTTCTCGACATCATACTTCAGGTAATAATCAAGCCAATGCAGGAAAAAATCATACAGTTTCTCAGAATTTGGAAGCCAGTGGTGCTGCAGGCATGTCTTCATATGGTAAAACAAACTTTCAGTGGGGCCCTCACTCTAGCATGGCTGGTTTTGGTGGTGTGGATGGATCATCATCTGTCGCTGCTCAAGCTGCAAGTGTTGTGCAACAGGCTAGTGAGAAAGTCAGGAGAGAAAGGGAGGGAGCGCCATCAATTGCTGAATGGGAGAGAAGTCAAATGTCTAAGAGGGCTGATGCTTCTTTTCATAAAGTGGAGAAACCTTGGAAGAGGAGGAGGCCAGACGATGCTGGTATGAATGGTATTAAAGGATACATGACAAACCATATGACCATGGGCCAAGGAGCAGCTGGTACGGGATATGCTTCTGATCTGAGAAAAGCTAACTGGGAAACTGAAAGAAGCTATGGTTTTTCAGGCATGAAGTCTAACAGTACGAGAGAGTTGTCATTGTTTGAAATCCGAAATATGTTGGTGGACAAAGCACAAAGTGAAATTCGTAAGAAACTTGAAGAATGGAAATTAGCTCAATCTGAGATCACAAGCAAGTTCAAAGAGAGTAAGAGACAAAAAAGCACAATGACTGGTAAAACATCTGATCCAAAGAAACATAAAGAGTCCATTCTTGATAAAAGTGGTCGTGTAGAAGGTGATTCTTTCCCTGACGCATCTGATAATGCGGTTAAGGAGGATCAATCCTACATCATTATGAATGTTCCTGACCCTGATTTCCACAATTTTGACTTGGATAGAACTGAAAATGCCTTTGGTGAGGACCAGGTCTGGGCTGCTTATGATGATGATGATGGAATGCCCCGTTATTATGCTCGAATTCACAAGGTGTTATCCATGGAGCCATTTAGAATGCGAATAAGCTGGCTTAACTCTAGAAGCAACAGCGAATTGGGTCCTATAGATTGGATAGGTGCTGGTTTTACTAAAACTTGTGGGGACTTTAGGACTGGCAGGCATGAAATAACTGAGTCATTAAATTCGTTCTCACACAAGGTAAGGTGGACAAAAGGCACCAGAGGAGTCATTCGCATCTTTCCCTTGAAAGGGGAAGTATGGGCTATTTATAAGGACTGGTCTCCTGATTGGAACGAACAGACTCCAGACGAAGTGATACACAAATATGATATGGTGGAGGTGCTTGAAGATTTTGACGAGGAGCTTGGGGTATTAGTTGCCCCATTGATCAAGCTTACGGATTTCAGGACTGTGTTTAGAAGGTATGCTGACCCTGATCGCGTGACCAGGATTCCTAAAGGGGAGATGTTTCGCTTTTCACACCAGGTTCCTAATTACATGCTTTCAGGCGAAGAAGCTGATAATGCTCCTAAGGGTTGTCGAGAGTTGGATCCAGCAGCTACACCTTTAGACCTTCTTCAACCCACTACGGAACCTAATGAGGGATCGGGTGCTGAAAGGCCTGTCAAAGACGCTTTGCCCAATTCAAACGAAATGGAGAAAGCTTCAGAAACAAGAGGAGGGGAACAATTGAACGAGATTTTTACATAG 2313 0.4297 MDCNKDEAVRAKEIAEKKFSDREYAGAKKFALKALNLYPALDGLSQFLTNLDVYISAENKVSGEMDWYGILGVNPFDDEETVRKQYRKLALTLHPDKNKSLGAEGAFKLVSEAWSLLSDKTKRLEYNLKRSLKGFQHKTPNHAGSQSEVPGSNGFYNFNKNVTSDVRAGNSNAQVRHASIPRPQKKADTFWTICNRCRTHYEYLRVYLNHRLLCPNCNEAFLAVEKEPPPNYFKSTNWSSRQQHQSSRHHTSGNNQANAGKNHTVSQNLEASGAAGMSSYGKTNFQWGPHSSMAGFGGVDGSSSVAAQAASVVQQASEKVRREREGAPSIAEWERSQMSKRADASFHKVEKPWKRRRPDDAGMNGIKGYMTNHMTMGQGAAGTGYASDLRKANWETERSYGFSGMKSNSTRELSLFEIRNMLVDKAQSEIRKKLEEWKLAQSEITSKFKESKRQKSTMTGKTSDPKKHKESILDKSGRVEGDSFPDASDNAVKEDQSYIIMNVPDPDFHNFDLDRTENAFGEDQVWAAYDDDDGMPRYYARIHKVLSMEPFRMRISWLNSRSNSELGPIDWIGAGFTKTCGDFRTGRHEITESLNSFSHKVRWTKGTRGVIRIFPLKGEVWAIYKDWSPDWNEQTPDEVIHKYDMVEVLEDFDEELGVLVAPLIKLTDFRTVFRRYADPDRVTRIPKGEMFRFSHQVPNYMLSGEEADNAPKGCRELDPAATPLDLLQPTTEPNEGSGAERPVKDALPNSNEMEKASETRGGEQLNEIFT 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1864 770 MobiDBLite consensus disorder prediction 448 487 - -
Acco05g1864 770 MobiDBLite consensus disorder prediction 448 482 - -
Acco05g1864 770 MobiDBLite consensus disorder prediction 316 360 - -
Acco05g1864 770 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Acco05g1864 770 MobiDBLite consensus disorder prediction 233 261 - -
Acco05g1864 770 Gene3D DnaJ domain 63 176 IPR036869 -
Acco05g1864 770 Pfam DnaJ domain 66 127 IPR001623 -
Acco05g1864 770 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Acco05g1864 770 MobiDBLite consensus disorder prediction 707 770 - -
Acco05g1864 770 MobiDBLite consensus disorder prediction 317 360 - -
Acco05g1864 770 Pfam Domain of unknown function (DUF3444) 500 706 IPR024593 -
Acco05g1864 770 SUPERFAMILY Chaperone J-domain 58 126 IPR036869 -
Acco05g1864 770 CDD DnaJ 66 119 IPR001623 -
Acco05g1864 770 PANTHER BNAC03G44070D PROTEIN 1 723 - -
Acco05g1864 770 PRINTS DnaJ domain signature 86 101 IPR001623 -
Acco05g1864 770 PRINTS DnaJ domain signature 68 86 IPR001623 -
Acco05g1864 770 PRINTS DnaJ domain signature 102 122 IPR001623 -
Acco05g1864 770 SMART dnaj_3 65 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1864 Acco-ChrAcco05 35094101 35096413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1864 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 32.906 2.26e-29 118