Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1854 ATGAACTCCAGAACTTGTTCGTGGAGCTTGGTACTGCTCTTGCTTATCCACACGGGGTGGTGCCAACAACGTCACTGCAAGGAATTAAGGTGCGGACGTCATGGCGTGGTTCGATTCCCCTTCCGACTCAAAGATGAGCACCCGGCCGAGTGCGGCTATCCTGGCTTTGATATCACCTGTTATCATAACCGCCAACTCCTCCTTCAACTGCCCACACCTTCAGGTTCCGTAGACCTCTTCATCAAACACATTGATTACCCTTCCCAGTCACTTCAAGCATATGATCCCCAAAATTGCCTTCCTGCCTTGTTACACAAACTCCACAACTCCACGATATCACCCTTCAAATTTAAGTCAGCCAAACGGTTCGCCAACGTTACTTTCCTTAATTGCTCTTCAGACGGCCATCGGCACATAAACCATTTCACTAGCCGCGTTCAAAACATAGACATGGTCTCTTGCCCGATTTATGTTGGTTACTCCCACTACTCTTTCATGGTGGAGGACCTCCTATTCTGTACCAAGATTATCGATATTTCATCAAATCAGCTCAATAACATAGGGCAGAATAATGTTTTGTCCTTCAGTTGGATGAAACCCAATTGTACTGGATGCGAAAGGAAGGGACAAATGTGTAAATTGAAGAAGAATAACGGCACAAAAGATGAAATTGAATGTGTTGACCATGATCCCAAGATATCTAGATCAACTATTAAACTCATAGCAGGTCTAACCTCGGGTTCAGTTGTGTTGCTTCTGGTGCTCCTTGCACTCTATCAGTACTACAGATATTTGAGATTGAAAGGTGAAGATCTTGCGAGACTTCAAAAATTTTTGGATGACTATCGCTTGCTCAAACCAACCAGATTCACTTTTTTCGATCTGGAACGAATCACGTGTGGTTTTGAAGAGAAGTTAGGTGAAGGTGCTCATGGAGCAGTGTTCAAAGGAAAGCTTTCTGATGAAATTTTGGTAGCTGTGAAGATGCTCAACAACTCAAAGGATGATGATGGCAAAGAGTTCATAAATGAAATGGGAGTTATAGCTAAAATCCACCATGTCAACGTGGTTCGCTTATTGGGCTTCTGTGCTGATGGAATTCACCATGCTCTTGTTTATGATTATTTTCCAAATGGTTCCTTGCAAAACTTCATATCTGCTCCAAATGGCCATGGCTCATTCCTTGGTTGGGAAAGGCTGCAACAAATTGCTCTTAGTATAGCCAAAGGGATTGAGTATCTGCACCAAGGTTGTGATCATCAAATTCTTCACTTTGACATTAATCCTCATAATATATTATTGGATGACAACCTCGTTCCAAAAATCTCTGATTTTGGTTTAGTCAAATTGTGTCCAAAAAATCAAAATACAGTGTCTATGACAGCAGCAAGAGGAACTCTAGGTTATATTGCTCCAGAAGTTTTCTTTAAAAATTTTGGAAATGTTTCTTATAAGTCGGATATCTATAGCTTTGGAATGTTAATGATAGAAATGGTAGGAGGAAGAAAGAATACGGACACAATTCAAGAAAAGTTTCAAGTTTTATATCCGGAATGGATTCATAGTTTGGTTGAGGGAGGTGGCGTACATATCATGATAGAAAATCAAGAAGACATTAGAATTGCAAAGAAACTAGCTATTGTAGGACTTTGGTGTATTCAATGGCACACAATAAATCGTCCATCCATTAATAAGGTAGTGCAAATGTTGGAAGGCGACGAAGATGAGTTGGAAGTCCCTCCTACCCCATTTGACTCCTCTTCCATCAACACAACTATGGTAGCTCCTGCAAGGCATTTAGGCTTAGAGTTGGAAGTGATTCATGAATTGGAATAA 1836 0.4101 MNSRTCSWSLVLLLLIHTGWCQQRHCKELRCGRHGVVRFPFRLKDEHPAECGYPGFDITCYHNRQLLLQLPTPSGSVDLFIKHIDYPSQSLQAYDPQNCLPALLHKLHNSTISPFKFKSAKRFANVTFLNCSSDGHRHINHFTSRVQNIDMVSCPIYVGYSHYSFMVEDLLFCTKIIDISSNQLNNIGQNNVLSFSWMKPNCTGCERKGQMCKLKKNNGTKDEIECVDHDPKISRSTIKLIAGLTSGSVVLLLVLLALYQYYRYLRLKGEDLARLQKFLDDYRLLKPTRFTFFDLERITCGFEEKLGEGAHGAVFKGKLSDEILVAVKMLNNSKDDDGKEFINEMGVIAKIHHVNVVRLLGFCADGIHHALVYDYFPNGSLQNFISAPNGHGSFLGWERLQQIALSIAKGIEYLHQGCDHQILHFDINPHNILLDDNLVPKISDFGLVKLCPKNQNTVSMTAARGTLGYIAPEVFFKNFGNVSYKSDIYSFGMLMIEMVGGRKNTDTIQEKFQVLYPEWIHSLVEGGGVHIMIENQEDIRIAKKLAIVGLWCIQWHTINRPSINKVVQMLEGDEDELEVPPTPFDSSSINTTMVAPARHLGLELEVIHELE 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1854 611 ProSiteProfiles Protein kinase domain profile. 300 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1854 611 FunFam S-receptor-like serine/threonine-protein kinase 273 375 - -
Acco05g1854 611 FunFam PR5-like receptor kinase 376 581 - -
Acco05g1854 611 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Acco05g1854 611 Pfam Protein kinase domain 303 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1854 611 Gene3D Transferase(Phosphotransferase) domain 1 376 580 - -
Acco05g1854 611 SUPERFAMILY Protein kinase-like (PK-like) 283 571 IPR011009 -
Acco05g1854 611 PANTHER RUST RESISTANCE KINASE LR10-RELATED 279 586 IPR045874 GO:0004672
Acco05g1854 611 Pfam Wall-associated receptor kinase galacturonan-binding 26 95 IPR025287 GO:0030247
Acco05g1854 611 Gene3D Phosphorylase Kinase; domain 1 276 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1854 Acco-ChrAcco05 35023750 35025669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1854 31 583 Receptor kinase-like Gene Family AT1G66910 33.169 2.09e-93 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Acco05g1854 Pkinase 2.9e-45 CL0016