Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1840 ATGAACTACGGCAGGCTCCAACCCTCCCAGCCCGGTGGCTCCTCCCGCCGCTCTGATGACCCCATTCCTCCCGCCGCCTCCCCTCGCAGCAAGAAGAAACTCATCTTCCTCTCCGCACTCGCTCTTGTCCTGATCGTCGCTTCAGCCCTCTCCGCCGTCATCCTTGTCGGCACCCGACCTCGTTCTACGCCTCCACACGATTCCGGCATCGGCGACAAGCCCACTCAGGCCATTTCACGCACCTGCGAAAAAACTCGGTTCCCTTCCCTCTGTGTTAAGTCCCTCCTCGATTTCCCCGGTTCCGCCGCCGCATCGGAGCAGGAACTCGTCCACATTTCTCTCAATATGACATTACAACACCTAAGCAAAGCCCTCTATTCCTCCACCGCCATCTCCACCGTCCAGATGAATCCGCTTGAACGGTCCGCCTACGAGGACTGTCTCGAGCTCCTCGAGGATTCCGTCGACGCGTTCCTCCGCTCCCTCACCTCGGGATCCGCCGGCGGAGGATCCACCGACGATGTGCTGACGTGGCTCAGCGCAGCACTCACGAATCTAGACACGTGCAGCGAGGGGTTCGCGGACACGAGCGGCACAGTGAAATATCAGATGGCAAGTAATTTAAAGGACTTGTCCGAGGTCATTAGCAACTGTCTCGCCATATACGCAGGAAGCGATGCCGGCAACGATTTCTCAGGGGTTCCAATTCAGAACAGGAGAAGATTAATGGGAGACAATGATAATGGAGACGTCTCAGGCGAATTCCCGGCCTGGTTAAGCAAAAGAGACAGAAGACTGTTGGCCAAGCCGGCATCGTCGATTCAAGCTGATATTGTCGTGTCGAAGGACGGAAGCGGAACCGTTGAGACCATCGCGGAGGCGATAAAGAAAGTGCCTGAGCACAGTAGTCGCCGGATTGTTGTGTACGTGAAGGCAGGAAGCTACGAAGAGGAAAATTTGAAGGTTGGGAGGAAGAAAACGAATGTGATGTTCGTAGGTGATGGGAAGGGCAAGACAATCATCACGGGTGGCAGAAATTTTGCACAAGGCACCACCACCTTCCACACTGCTTCCTTCGCTGCTACTGGGACTGGTTTCATTGCAAGGGACATGACATTTGAGAACTATGCGGGGCCCGGGAAGCACCAAGCGGTGGCGCTTCGTGTCGGAGCCGACCATGCGGTGGTGTACCGATGCAGCATCATCGGATACCAAGACACATGTTATGTCCACTCCAACCGTCAGTTCTTCCGGGAATGTGACATTTATGGAACCGTCGACTTCATCTTCGGCAACGCAGCTGTGGTTTTCCAGAGCTGCAATCTCGTATCTCGAAAGCCCATGGACCAACAGAAGAACACCATAACGGCCCAAAATCGAAAAGACCCGAATCAGAACACGGGTATTTCCATTCATAACTGTCGGATCCAATCGGATTCGGATCTGGGGGCCGCCAAGGGAAGCTTCCCAACCTATCTGGGCCGTCCGTGGAAGACGTACGCTAGAACCGTCTACATGCTATCGTACATGGGCGATCACATCAGTCCACGTGGATGGTTGGAGTGGAATGCCACGGCTCCAGTAGACAAATTGTATTTTGGAGAGTATATGAATAGTGGGCCGGGTGCAGCTGTTGGAGGCCGGGTCAAATGGCCAGGGTACAGGGTTATAACATCCGCGGCGGAGGCAAGTAGATTCACGGTGGCCCAATTCATAGCAGGGTCGTCATGGTTGCCGTCAACAGGGGTGGCATTTGTCGGAGGACTATCAAGCTAG 1776 0.5479 MNYGRLQPSQPGGSSRRSDDPIPPAASPRSKKKLIFLSALALVLIVASALSAVILVGTRPRSTPPHDSGIGDKPTQAISRTCEKTRFPSLCVKSLLDFPGSAAASEQELVHISLNMTLQHLSKALYSSTAISTVQMNPLERSAYEDCLELLEDSVDAFLRSLTSGSAGGGSTDDVLTWLSAALTNLDTCSEGFADTSGTVKYQMASNLKDLSEVISNCLAIYAGSDAGNDFSGVPIQNRRRLMGDNDNGDVSGEFPAWLSKRDRRLLAKPASSIQADIVVSKDGSGTVETIAEAIKKVPEHSSRRIVVYVKAGSYEEENLKVGRKKTNVMFVGDGKGKTIITGGRNFAQGTTTFHTASFAATGTGFIARDMTFENYAGPGKHQAVALRVGADHAVVYRCSIIGYQDTCYVHSNRQFFRECDIYGTVDFIFGNAAVVFQSCNLVSRKPMDQQKNTITAQNRKDPNQNTGISIHNCRIQSDSDLGAAKGSFPTYLGRPWKTYARTVYMLSYMGDHISPRGWLEWNATAPVDKLYFGEYMNSGPGAAVGGRVKWPGYRVITSAAEASRFTVAQFIAGSSWLPSTGVAFVGGLSS 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1840 591 PANTHER PECTINESTERASE 45 579 - -
Acco05g1840 591 ProSitePatterns Pectinesterase signature 2. 422 431 IPR033131 -
Acco05g1840 591 Pfam Plant invertase/pectin methylesterase inhibitor 77 221 IPR006501 GO:0004857
Acco05g1840 591 Pfam Pectinesterase 277 574 IPR000070 GO:0030599|GO:0042545
Acco05g1840 591 FunFam Pectinesterase 271 589 - -
Acco05g1840 591 SMART PMEI_2 73 221 IPR006501 GO:0004857
Acco05g1840 591 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 76 222 IPR035513 -
Acco05g1840 591 SUPERFAMILY Pectin lyase-like 274 588 IPR011050 -
Acco05g1840 591 Gene3D Invertase/pectin methylesterase inhibitor family protein 75 224 IPR035513 -
Acco05g1840 591 MobiDBLite consensus disorder prediction 1 16 - -
Acco05g1840 591 NCBIfam pectinesterase inhibitor domain 65 222 IPR006501 GO:0004857
Acco05g1840 591 Gene3D - 271 589 IPR012334 -
Acco05g1840 591 MobiDBLite consensus disorder prediction 1 28 - -
Acco05g1840 591 CDD PMEI-like_3 82 221 - -
Acco05g1840 591 FunFam Pectinesterase 74 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1840 Acco-ChrAcco05 34789119 34792954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1840 1 590 Carbohydrate Esterase AT5G53370 63.193 0.0 778