Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1832 ATGCTGGCACAAGTCTCTTCTTTGTCTATAGCATTAGTGCATTGCCACCAAGTCTTTACAGAGACAGTTGTTGATTCTAGAAGGAAAAAGGGCCTGAGGAGTTTAATGTGCCACCAGTGCTGGAGGAGTGATAGGAGTGGTGTTGTCATTTGTGGCAATTGCAAACAGAAGCGATATTGCTATGAGTGCATAACAAAATGGTATCCAGACAAAACAAGAGAGGAGATCGAATTTTCCTGTCCCTTTTGCCTTGGTAATTGCAATTGTCGGTTGTGTTTGAAGGACGCTGTATCTGGAGAGACTGCGAGTGTTGAATCAGATACTGATATCAATTTACAAAAGTTGCTCTACTTGCTTGAGAAAATTCTTCCTTTACTCCAGCATATCCAACAAGAGCAGAGATCAGAAATCGAAATAGAATCTAGCTTGCTTGGTTCACTACTGACAGAAGAAAATATCATGCAGTCACAGATTGATGATGATGATCGAGTGTATTGTGACAACTGTAATACATCCATCGTCAACTTGCACAGAAGTTGTCCTAATCCTAGTTGTAGTTACGATCTCTGTCTCACTTGTTGCATGGAACTAAGAAATGGACTTCATTGTGGAGATATTTCCACTAACGGCAATGAGGGAGGGGCTGATATCTCATCCGAATTGTCTTGGAAAGCAAATATAAATGGTTCGATTCCTTGCCCTCCAAAATCAAAAGGAGGCTGTGGTACTACAATTCTCTCATTGAGACGCCTATTTAAAGCTAATTGGGTGGACGAATTGGTTGGGAATGCGGGGGAACTTACCATTAAATATGAGCCCCCTAATGTCGATTCCACCAAAGGATGTTTATTGTGCCATAATTTTAGGATTGATACAGAACAGGATTTTGTCAGGCAAGCGGCTTCCAGAGAAAACTGCCATGATAATTTTTTGTTCTGCCCAAATGCTATGCATATGGGAGATAAAGAATTCAAGCATTTCCAGATGCATTGGATAAGTGGTGAGCCTGTTATAGTCAGGAATGCAATTGGAAAGGCTAGGGGCCTTAGCTGGGATCCAATGGTGATGTGGAGGGCTTTTAGGGGGGCCAATAGGATACTAAAAGAGGAGGCAACTGCGGTTAAAGCCATTGACTGCTTAGATTGGTGCGAGGTTGAAATTAATATCTTACAGTTCTTCAAGGGTTACCTTGAAGGTCGTAGGTATAAAAATGGGTGGCCTGAGATGTTGAAGCTTAAGGATTGGCCTCCATCAAATGCTTTTGAAGAGTGTTTTCCCAGGCATGGTGCTGAGTTTATTGCTATGCTTCCATTCAGTGACTATACTCATCCCAAATCTGGTATTCTAAATCTCACTACGAAGCTACCTATTGTTTTAAAGCCAGATTTGGGCCCCAAAACATACATTGCATATGGATCTTTAGAAGAGCTCGGCAGAGGTGATTCTGTAACAAAACTGCATTGTGACATCTCAGATGCGGTCAACATATTGACACATACAGCGGAAGTAAAGAGACCACCATGGCAAAGAAAAGCCATAAAACAATTACAGAAAAGGCACGAAGCTGAAGATATGTGTGCGCTCTATAGCTGGAAGAATGAAGGATTGGATTCTTGTAGGAAAAAAACAAAATGGTGCCGCCTCAATATAAGCACGGATTCGAAAACCCCTAGAAAAGAAGACATTATCGTGGGACACTCTAATGTACTTAAAAGTCAGGTATCAGAGGAAGAGAATATGAATGAACAGTGGAATATGTCTGGAGATTTGGGACCCTCGAGAGCATATATGGCAGCTTGCACTCTAAAACACTCAGCTTCTCCCAAAAGTGAAAAAAAAGACTATGAATGGATGCACGGTGAAGATAAGAATGCTGTCAAAAAATGCTCATTATCACAAGATGGACATCATGAAGGAATTCCATCCCCTGAACATATGCTGTCTAAAACATTCACTAAAGACAGTTATGAAAAAGAAAAAACTTCTGAACAATCTGAGTTAAAAGGCAGGTGCATGTGTGCTGAGGAGTCTCCTAATGGAATCATTCCCAACTTTGAGAATGATTGTGACAGTTCCTGTGCGGGGACATGTTCTGAAGTGAAGAATGACAAAATAGAGTCACTTAGAAATTATACGAGAACAGCAAAAGCTTTCCTTGAAAATGATGATGTGTCAGACGCCCAATATGGGAGTGCTGTATGGGACATATTTCGTAGGCAAGATGTGCCAAAGCTGACGGAGTACCTGAAGAAACACTGCAGAGAATTCCGTCACGTAGATAATCTTCCTGTGAATTCTATAATACATCCAATTCATGACCAGACTCTTTATCTAAACGAAAGACATAAAAAGCAGCTAAAGGAAGAATTTGGCATTGAACCATGGACATTTGAGCAACACCTTGGGGAGGCTGTTTTCATACCTGCAGGGTGCCCGCATCAAGTGAGGAATAGACAGTCTTGCATAAAAGTGGCTCTCGACTTTGTTTCACCTGAAAATGTTCAAGAGTGCGTTCGATTGACGGATGAGTTTCGGTTGCTTCCAAAGAACCATAGATCTAAGGAAGATAAACTGGAGATAAAGAAGATGGCATTATATGCTGCTGACGCTGCTATAACTGAAGCCATGAAATTAATGCAGAGGATATGA 2649 0.4122 MLAQVSSLSIALVHCHQVFTETVVDSRRKKGLRSLMCHQCWRSDRSGVVICGNCKQKRYCYECITKWYPDKTREEIEFSCPFCLGNCNCRLCLKDAVSGETASVESDTDINLQKLLYLLEKILPLLQHIQQEQRSEIEIESSLLGSLLTEENIMQSQIDDDDRVYCDNCNTSIVNLHRSCPNPSCSYDLCLTCCMELRNGLHCGDISTNGNEGGADISSELSWKANINGSIPCPPKSKGGCGTTILSLRRLFKANWVDELVGNAGELTIKYEPPNVDSTKGCLLCHNFRIDTEQDFVRQAASRENCHDNFLFCPNAMHMGDKEFKHFQMHWISGEPVIVRNAIGKARGLSWDPMVMWRAFRGANRILKEEATAVKAIDCLDWCEVEINILQFFKGYLEGRRYKNGWPEMLKLKDWPPSNAFEECFPRHGAEFIAMLPFSDYTHPKSGILNLTTKLPIVLKPDLGPKTYIAYGSLEELGRGDSVTKLHCDISDAVNILTHTAEVKRPPWQRKAIKQLQKRHEAEDMCALYSWKNEGLDSCRKKTKWCRLNISTDSKTPRKEDIIVGHSNVLKSQVSEEENMNEQWNMSGDLGPSRAYMAACTLKHSASPKSEKKDYEWMHGEDKNAVKKCSLSQDGHHEGIPSPEHMLSKTFTKDSYEKEKTSEQSELKGRCMCAEESPNGIIPNFENDCDSSCAGTCSEVKNDKIESLRNYTRTAKAFLENDDVSDAQYGSAVWDIFRRQDVPKLTEYLKKHCREFRHVDNLPVNSIIHPIHDQTLYLNERHKKQLKEEFGIEPWTFEQHLGEAVFIPAGCPHQVRNRQSCIKVALDFVSPENVQECVRLTDEFRLLPKNHRSKEDKLEIKKMALYAADAAITEAMKLMQRI 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1832 882 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 34 103 IPR018866 -
Acco05g1832 882 SUPERFAMILY Clavaminate synthase-like 321 869 - -
Acco05g1832 882 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Acco05g1832 882 SMART cupin_9 425 845 IPR003347 -
Acco05g1832 882 FunFam Transcription factor jumonji (JmjC) domain-containing protein 652 854 - -
Acco05g1832 882 Gene3D Cupin 645 854 - -
Acco05g1832 882 Gene3D Cupin 306 587 - -
Acco05g1832 882 ProSiteProfiles JmjC domain profile. 444 845 IPR003347 -
Acco05g1832 882 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 26 879 IPR045109 GO:0032454|GO:0033169
Acco05g1832 882 Pfam JmjC domain, hydroxylase 728 828 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1832 Acco-ChrAcco05 34684051 34689826 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Acco05g1832 JmjC 1.7e-16 CL0029