Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1826 ATGGGGAAGAAGGGTGGAGGTGGTTGGTTCTCGTCGGTGAAGAAAGTTTTCAAGAATTCTTCGAAGGACTCGCCGGTGTCGGAGAGGAAGAAGGAAGATGAAGTGAAACGACAACATGAAGTTCCTGAGGTTGTGTTGTTTGAGAATTTTCCTGCTGAGAGTTTTCATGATGATATTACCAATGAGGAGAGTACAACGTCCACGCCTGTGACTGAAGATAGACGACATGCCGTTGCTGTTGCTGCGGCAACTGCTGCAGCTGCTGAGGCAGCGGTCGCAGCCGCTCAAGCAGCGGCGAGAGTTGTCAAGATGGCGGGTTATGGTCGCCAATCCGAGGAAGATAAAGCAGCAACAATCATTCAATCATACTACAGAGGCTACCTAGCTCGACGTGCGCGGCGAGCTTTAAAGGGATTGGTGAGACTGCAAGCGCTTGTGAGAGGTCACAACGTGAGAAAGCAAGCGCAAATGACAATGCGTTGTATGCAAGCGTTGGTGAGAGTGCAAGCCAGAGTCAGAGCTCGCAGGATTCAGCTGACTCATAACAAGCTTTACAAGAACATGATGGCACATGATTTAGTGCCCATGAGTCCCTTGTACGAGGATGTTTGGGGCAATAGGCGTCACAGTTTCCAGAGAATCAATGACAGTGACTTGTGGAAACATGAAGACGCAATGAAGAGGGAGAGAGCTCTTGCTTACGCTTTTAAACATCAGCAACAGAACCAACCACCACATGCAGGCCTGAATCTTGGTGAAGAAATGGAAACATATTCCAATGAGCTTGAAGAAGCCAAGCGGGGTTGGAACTGGCTAGAACGTTGGATGTGCTCTCAACAACATCAAGCCAGGCACTTGGAGCCACCGGAGAACTCTTATTACATGACCCACGCTGCCACAACCACCACCACCCCCACCACCGCTGATGCCGTGTCTGAGAAGACGGTGCAAATGGACAGTATTGCCCCTCCAAGCTCAAGCAACACCATCATGGGCCAAGGCCTTCTTCTGGAATCAAGCCCAATTCCCAACATGCGGCCCAATAACCTGCAGGCCCAGCATAACGCAAGTGTACCTAGCTATATGGCCCCAACCCAATCTGCGAAGGCCAAGGTAAGGGGTCAAGGCCCATTCAAGCCACGTGGCTCTCCTGTGCCACAGTGGAATTCTTCAACAGGGAAGGGCTACGTTATTGGGCCGGGCTATGATTCCTCCAGCTCAGGTGGAGGAGGGGCAGGTTACCTGTTTATGAGGAGCCCAGGCCCGAAAATTAGTGGGGCCCGCCTACAGTCTAGAAAGATGGCAGGAGGAGGCTCAGAATATGTTGGTACTGAGGATTGGACACTGCCTCTAGGAGCCCATGCTTGGGCATGA 1374 0.5153 MGKKGGGGWFSSVKKVFKNSSKDSPVSERKKEDEVKRQHEVPEVVLFENFPAESFHDDITNEESTTSTPVTEDRRHAVAVAAATAAAAEAAVAAAQAAARVVKMAGYGRQSEEDKAATIIQSYYRGYLARRARRALKGLVRLQALVRGHNVRKQAQMTMRCMQALVRVQARVRARRIQLTHNKLYKNMMAHDLVPMSPLYEDVWGNRRHSFQRINDSDLWKHEDAMKRERALAYAFKHQQQNQPPHAGLNLGEEMETYSNELEEAKRGWNWLERWMCSQQHQARHLEPPENSYYMTHAATTTTTPTTADAVSEKTVQMDSIAPPSSSNTIMGQGLLLESSPIPNMRPNNLQAQHNASVPSYMAPTQSAKAKVRGQGPFKPRGSPVPQWNSSTGKGYVIGPGYDSSSSGGGGAGYLFMRSPGPKISGARLQSRKMAGGGSEYVGTEDWTLPLGAHAWA 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1826 457 Pfam Protein of unknown function (DUF4005) 340 381 IPR025064 -
Acco05g1826 457 Gene3D - 111 162 - -
Acco05g1826 457 Pfam IQ calmodulin-binding motif 115 131 IPR000048 GO:0005515
Acco05g1826 457 Pfam IQ calmodulin-binding motif 140 155 IPR000048 GO:0005515
Acco05g1826 457 MobiDBLite consensus disorder prediction 19 38 - -
Acco05g1826 457 PANTHER IQ-DOMAIN 5-RELATED 1 390 - -
Acco05g1826 457 ProSiteProfiles IQ motif profile. 113 141 IPR000048 GO:0005515
Acco05g1826 457 ProSiteProfiles IQ motif profile. 137 164 IPR000048 GO:0005515
Acco05g1826 457 SMART iq_5 134 156 IPR000048 GO:0005515
Acco05g1826 457 SMART iq_5 112 133 IPR000048 GO:0005515
Acco05g1826 457 MobiDBLite consensus disorder prediction 372 391 - -
Acco05g1826 457 MobiDBLite consensus disorder prediction 21 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1826 Acco-ChrAcco05 34627031 34630952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1826 1 423 IQD Protein Family AT3G49260 49.670 2.55e-92 286