Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1820 ATGGAATTTCTTACTCCCCAGTCACATCACCTTTTCTCTCCCACAAATATGGACTTCGACCCAAGTGACTTTGATTTACCAAACATCGAATATCCACATGGCTTCTGCTCCCATAACCCTACCTGGCAGCAAGAAACATTATGGAAGATGTCGCCTGTGATGGGTTTAGGTGGGATGGACCTTATGGTCCCACCACCGCCATATGAAAGCAACCCACTTTCTTACTCCAACCCGTTCGCTGAACTCGAAAATTTCGGCTCCAACTTCTCTGGGTTTGATTACAACAATTTCGTTTCTTTATATGATGACGTTGCGATCGACGAAAAGCCTCTTACCATTGCTCTGCCCAATCACTCTCAGTGCGAGGTTTTTCCGATTCATATGGCCCAATCTTCAAGTTCTATGTTCATTGGAGGTGGGTTTATTGCCCCTTCGATTAAAGAAGATGATGATCATGAGACCAGGAACAGGATTAACTATAACAAAAAGAAAATATCAGCCAATTTGGAACTAGACGATATAAGGAAGTATTTTGATGTTCCCATAACCCAAGCTGCGAAACAACTGAACGTGGGTTTGACCCTGCTCAAGAGAAGATGCAGGGAGCTCAGTATTTCACGGTGGCCTCATCGGAAAATCAAGAGCTTGAAGGCCCTCATCGACAATGTCAAGGAACTGGGTTTGGCAGAGGAGGTGGCTATGCTGGAGAATCATAAGAAGCTTATGGAGAAGTTGCCTGATGTGGAACTGAGTGAGCAAACTAAGAAGCTTAGGCAAGCATGTTTCAAAGCCAATTACAAAAGGAGAAGATTCTTGGCACTTCAAACCCAGGCCTGA 837 0.4444 MEFLTPQSHHLFSPTNMDFDPSDFDLPNIEYPHGFCSHNPTWQQETLWKMSPVMGLGGMDLMVPPPPYESNPLSYSNPFAELENFGSNFSGFDYNNFVSLYDDVAIDEKPLTIALPNHSQCEVFPIHMAQSSSSMFIGGGFIAPSIKEDDDHETRNRINYNKKKISANLELDDIRKYFDVPITQAAKQLNVGLTLLKRRCRELSISRWPHRKIKSLKALIDNVKELGLAEEVAMLENHKKLMEKLPDVELSEQTKKLRQACFKANYKRRRFLALQTQA 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1820 278 Pfam RWP-RK domain 168 216 IPR003035 -
Acco05g1820 278 PANTHER PROTEIN RKD4 96 275 IPR044607 GO:0003700
Acco05g1820 278 ProSiteProfiles RWP-RK domain profile. 151 237 IPR003035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1820 Acco-ChrAcco05 34575647 34576744 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1820 169 273 AtRKD Transcription Factor Family AT5G53040 64.762 1.28e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Acco05g1820 RWP-RK 1.9e-22 No_clan