Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1792 ATGGCGGGTTCTGACACCAAGATCTTGCAGGAATTGATTTTGTACGCAGCGAGCGCCGCGTTGAGTTGCCTGGTCTTGTTTGTGGGTCTTCGGCAACTCGACCCGAACCGTGAGGCTTCAAAGAAGGCACTCGAGCATAAGAAGGAGATAGCTAAGCGCCTGGGTCGTCCTCTCATTCAGACAAACCCTTACGAGGATATTATTGCTTGTGATGTTATAAATCCTGATGACATTGATGTGGAGTTTGGATCCATTGGAGGGCTGGAAAAGATAAAGCAAGCTTTATTTGAGCTTGTTATACTGCCTCTTAAACGACCTGAACTATTTTCTCATGGCAAGCTTCTTGGACCACAGAAAGGGGTACTATTGTATGGTCCCCCCGGAACTGGGAAAACTATGCTTGCCAAAGCTATTGCAAAAGAGTCTGGAGCTGTTTTTATTAATGTGAGGATATCAAACCTGATGAGCAAGTGGTTTGGTGATGCTCAAAAGCTTGTGGCAGCTGTATTTAGCCTGGCCTATAAGCTCCAGCCTGCCATTATATTCATCGATGAAGTTGACAGTTTTCTTGGTCAGCGCCGTTCAACAGATCATGAGGCATTATTAAACATGAAAACTGAGTTTATGTCCTTGTGGGATGGATTTACTACAGACCAAAATGCTCGAGTGATGGTCCTTGCGGCTACTAATCGTCCTTCAGAACTTGATGAAGCCATACTTAGGCGACTTCCTCAAGCCTTTGAAATTGGAGTTCCAGATAAAAAGGAGAGGGTTGAGATATTAAAGGTTGTCTTGAAGGGTGAGAGAATTGAAGACAACATTGACTTTGATCGCATAGCTGGCTTGTGTGAGGGTTATACGGGTTCTGATTTATTTGAGCTCTGTAAGAAAGCTGCCTATTTCCCTATTAGGGACCTACTAGATGAAGAGAAAAAAGGAAAGCAGTCTCCTGCACCAAGGCCATTGTCACAGTCAGATTTGGAGAAGGCCCTTGCCACCTCAAGGAAAACGAAGGTTGCTGCAGGTGAATATAATGGGTTAACCCTACAGTCGCCCAGATGGACAGGCCCCAGGGAGTCAGGTGATTACCAGTTTCAAGATGCAATCAGTGAATTATCTAAGCTTGTGGTTTCTCAAATTATTAACCTCCAATCCGATGCTCAGGATCCTTAA 1173 0.4467 MAGSDTKILQELILYAASAALSCLVLFVGLRQLDPNREASKKALEHKKEIAKRLGRPLIQTNPYEDIIACDVINPDDIDVEFGSIGGLEKIKQALFELVILPLKRPELFSHGKLLGPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYKLQPAIIFIDEVDSFLGQRRSTDHEALLNMKTEFMSLWDGFTTDQNARVMVLAATNRPSELDEAILRRLPQAFEIGVPDKKERVEILKVVLKGERIEDNIDFDRIAGLCEGYTGSDLFELCKKAAYFPIRDLLDEEKKGKQSPAPRPLSQSDLEKALATSRKTKVAAGEYNGLTLQSPRWTGPRESGDYQFQDAISELSKLVVSQIINLQSDAQDP 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1792 390 FunFam ATPase family AAA domain-containing protein 1 79 256 - -
Acco05g1792 390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 330 IPR027417 -
Acco05g1792 390 Gene3D - 252 332 - -
Acco05g1792 390 Pfam AAA+ lid domain 273 309 IPR041569 -
Acco05g1792 390 ProSitePatterns AAA-protein family signature. 223 242 IPR003960 GO:0005524|GO:0016887
Acco05g1792 390 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 43 341 - -
Acco05g1792 390 Pfam ATPase family associated with various cellular activities (AAA) 121 250 IPR003959 GO:0005524|GO:0016887
Acco05g1792 390 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Acco05g1792 390 CDD RecA-like_ATAD1 84 249 - -
Acco05g1792 390 SMART AAA_5 117 253 IPR003593 GO:0016887
Acco05g1792 390 Gene3D - 79 337 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1792 Acco-ChrAcco05 34295888 34301059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1792 38 317 Calmodulin-binding Proteins AT3G56690 32.746 1.82e-39 148