Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1770 ATGGGGAAGGTAGGAGCAAGCTCTTGGCTGACTGCAGTGAAAAGGGCTTTCCGGTCTCCAACAAAAGAAAACGATAAGAGAAGCAGTAGCAGGAGAAGAGAAGAACCAGAACAAGAAGAGGAGGAGGAAAAGAGGGGAAAGCGAAGATGGATTTTTAGGAAGGCGTTGGGTCAAGAAACAGTAGTAGCAACTCATCAGCTTTCTGAGGAAGGAACTATAACCACTGTTGCTGAGATTGCTGCAGGAAGTAGTAATGTGTCTGAGGTAGCTGATTCTGATCCTCAAGGACACGCCATTGCAGTAGCCATGGCAACTACAGCGGCGGCTCAGGCAGCCGTGGCATCTGCTCAGGCGGCCGTGGAAGCTGTTCGGCTAGCAAGGCCGTCCATCTTTGTCAGACGCCATTATGCTGCCACCACTATTCAAACAGCCTTCAGAGGTTATCTGGCAAGAAGAGCACTAAGGGCACTTAAAGGACTAGTGAAGCTGCAGGCATTAGTGAGAGGTCATAATGTCAGAAAAAGAGCAAAATTTACTCTTCAGTGTATGCAACTTCTTGTTCGAGTTCAAACTCGGCTATGTGAACAGCGAGCTAAGAATATTTCTCAACATGGAAGCTCTGGTTCTAGATTAAGTGATTCCTCTAATACATGGGTGTCACATTTAACTGACATCAAGTCCGTTTACTGTAGAGATGATGAAGTACAAACCATTGACAAGATTCGAGCTTCTCTAAAGAAAACCAAGGAAGTTGCCTCGAAACGAGAAGAGGACCTGGCTGATGCTTTCTCTCAACAGATATGGAGAACTTGCGGGGACCCCAGTGCCAGTGAGGGAGAGGCAGAGGAAATCTCTAGATGGTCTGATCCATGGATTGGAACAGGAAGAAGAAGAAGCTTGAACAGAGATCAAAGCACAGGTAGATCCTCGTGTGATCAAAGAGACCCTATCAAAATAGTTGAAATAGACACTTTTAGACCCTACTCAAACACATCTTGTGGATACAACTACAAGCCTCAGTTCAATTCTCCACTTAGAAGCCATACACTTGCTTTGTCTTCACCGATGCATAAAGCCCACTGTGAGGCCTCTTTGCAGCCCCCAATAGTGACACCATCACCTAGAAAGATGAAGCAGAATCTTCTTCAGGTACATTCATCGTCAGCTAGTCCTCGTTGCACCACCAAGCCCATATATTCAGTGCATGATGGTTCAGTGCCTAACTATATGGCTGCCACTGCTTCTGCTAAGGCTAGGCTTCGCTCAATGAGTGCACCAAGGCATAGGACTTCAAGCCCACAAAATTAG 1308 0.4633 MGKVGASSWLTAVKRAFRSPTKENDKRSSSRRREEPEQEEEEEKRGKRRWIFRKALGQETVVATHQLSEEGTITTVAEIAAGSSNVSEVADSDPQGHAIAVAMATTAAAQAAVASAQAAVEAVRLARPSIFVRRHYAATTIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKRAKFTLQCMQLLVRVQTRLCEQRAKNISQHGSSGSRLSDSSNTWVSHLTDIKSVYCRDDEVQTIDKIRASLKKTKEVASKREEDLADAFSQQIWRTCGDPSASEGEAEEISRWSDPWIGTGRRRSLNRDQSTGRSSCDQRDPIKIVEIDTFRPYSNTSCGYNYKPQFNSPLRSHTLALSSPMHKAHCEASLQPPIVTPSPRKMKQNLLQVHSSSASPRCTTKPIYSVHDGSVPNYMAATASAKARLRSMSAPRHRTSSPQN 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1770 435 MobiDBLite consensus disorder prediction 18 46 - -
Acco05g1770 435 MobiDBLite consensus disorder prediction 272 313 - -
Acco05g1770 435 ProSiteProfiles IQ motif profile. 134 162 IPR000048 GO:0005515
Acco05g1770 435 ProSiteProfiles IQ motif profile. 158 184 IPR000048 GO:0005515
Acco05g1770 435 SMART iq_5 156 177 IPR000048 GO:0005515
Acco05g1770 435 SMART iq_5 133 155 IPR000048 GO:0005515
Acco05g1770 435 MobiDBLite consensus disorder prediction 298 312 - -
Acco05g1770 435 Pfam IQ calmodulin-binding motif 161 177 IPR000048 GO:0005515
Acco05g1770 435 Pfam IQ calmodulin-binding motif 137 155 IPR000048 GO:0005515
Acco05g1770 435 PANTHER IQ-DOMAIN 5-RELATED 1 432 - -
Acco05g1770 435 Pfam Protein of unknown function (DUF4005) 373 434 IPR025064 -
Acco05g1770 435 MobiDBLite consensus disorder prediction 1 46 - -
Acco05g1770 435 Gene3D - 132 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1770 Acco-ChrAcco05 34094856 34096530 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1770 1 434 IQD Protein Family AT1G01110 39.836 1.03e-71 233