Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1755 ATGGCGTCTCATCTAACGCTTTCACCTGCCCCTCAAATCTCCCTGCATCCTGTTTCAACCTATTATCGCCGAGGGCTTTTCTCCGCAGCGAGGTTCAATGAACCATCGAGAGGCACGCTTACATTACTATTAAGTATCAAGTTTTTTGGACCCACCATGTCCACTTTCTCCAAATTCAGCAGCAGGAACTCTCTCGCCAATCCTCTCGCTGAAACGGGAGTGCTCTTCTCTTTGTTTCAAGAAATCGGATTAGGCTATGAGGAAACCGAAATGCTTTTAGCCAATCACCCTGAGCTTGCAATTATATCTTTGGATACATTACGTGATCGGGTTCGTTCTTTGCAGTCTTTTGTTGGGTTTGATCGTCTTGCTCTGCTGAACTTAGTCGTAAAGCGTCCAAATGTATTAACAGCCACGGAAATTGATGATTTGATATGTTTTTTACGAGATGAATTGGAAGGTCAGATAAATCAAGCACAGATGAAACGGCTATTATCCAATACCGAGCCAAGATTTTTTGTGGGTTTTGATCAAAAGGCCAAACTGCTTCTCAATAGAGGAATTCCCCGAGAAAAGATTATTCATGTGCTCAACAATGTGAATTTGACAAAGGCACTGTGTTATAGGTCGGTGGATGAAATCAATAGAACAATAGATTTCTTAGACCCCTTTGATGGCATTAATCTAATCATAAGGCGTCCTGCAATTATCAACTATGATTTGGATAATCAACTCATCCCAAGAACCAAGTTTTTGATTGAGCTTAGTGGAGGAGATGTGGATAGCACCGGGAAGGTGCTGCTTAAGCTGCCGGCAATTTTGAGTTACCGTGTGGAGCATGTAGAAGGCCATGTAGAGTTCCTGAGATCTTTTGCAGGTTTGAATGATCGAGAAATATTTCGTATAATTATGGTTTTTCCCAGTATTGTCAGTGCTAGCAGGGACAGGAAGCTGCGTCCTAGAATAGAGTTTCTCAAGGATTGTGGGTTGAATTCAGATGAAATCTTCAAGTTCTTGATAAAAGCTCCTTTATTTCTAGGCCATTCATTTCATGAGAACATTGCATATAAACTTGTTTTTCTGGTCAAGATTGGGTATGAGTATAGGACTAAGGATTTGGCAATGGCTATTGGATCTACCACTAGAACAAGCTGTGAGAATTTGCAGAAGGTGATTGATCTATTCTTGAGTTATGGGCTTTCATGCGAAGACATAGTTGTTATGAGCAAGAGGCATCCTCAGATACTGCAGTACAATCATACATCTCTGGAGAAGAAGATGAAGTACCTAATAGAGGAGATGGATCGTGACATTGACGAGTTACTAGCTTTTCCTGCTTTTCTTGGATATAAGCTGGACGACAGAATTAAAAAAAGGTTTGAAGAAAAGATCAGCAAGAGAGGAGCAAGAATGTCACTCAACAAGCTTTTAACTGTCTCATCTGAAAGTTTCGCTAGGAAAAGATAG 1467 0.4083 MASHLTLSPAPQISLHPVSTYYRRGLFSAARFNEPSRGTLTLLLSIKFFGPTMSTFSKFSSRNSLANPLAETGVLFSLFQEIGLGYEETEMLLANHPELAIISLDTLRDRVRSLQSFVGFDRLALLNLVVKRPNVLTATEIDDLICFLRDELEGQINQAQMKRLLSNTEPRFFVGFDQKAKLLLNRGIPREKIIHVLNNVNLTKALCYRSVDEINRTIDFLDPFDGINLIIRRPAIINYDLDNQLIPRTKFLIELSGGDVDSTGKVLLKLPAILSYRVEHVEGHVEFLRSFAGLNDREIFRIIMVFPSIVSASRDRKLRPRIEFLKDCGLNSDEIFKFLIKAPLFLGHSFHENIAYKLVFLVKIGYEYRTKDLAMAIGSTTRTSCENLQKVIDLFLSYGLSCEDIVVMSKRHPQILQYNHTSLEKKMKYLIEEMDRDIDELLAFPAFLGYKLDDRIKKRFEEKISKRGARMSLNKLLTVSSESFARKR 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1755 488 PANTHER CGI-12 PROTEIN-RELATED 78 255 IPR003690 GO:0003690|GO:0006355
Acco05g1755 488 SMART mt_12 90 121 IPR003690 GO:0003690|GO:0006355
Acco05g1755 488 SMART mt_12 264 295 IPR003690 GO:0003690|GO:0006355
Acco05g1755 488 SMART mt_12 227 258 IPR003690 GO:0003690|GO:0006355
Acco05g1755 488 SMART mt_12 300 331 IPR003690 GO:0003690|GO:0006355
Acco05g1755 488 SMART mt_12 126 155 IPR003690 GO:0003690|GO:0006355
Acco05g1755 488 SMART mt_12 336 367 IPR003690 GO:0003690|GO:0006355
Acco05g1755 488 SMART mt_12 406 437 IPR003690 GO:0003690|GO:0006355
Acco05g1755 488 SMART mt_12 438 470 IPR003690 GO:0003690|GO:0006355
Acco05g1755 488 Pfam mTERF 77 363 IPR003690 GO:0003690|GO:0006355
Acco05g1755 488 Pfam mTERF 339 485 IPR003690 GO:0003690|GO:0006355
Acco05g1755 488 Gene3D Transcription termination factor 3, mitochondrial 284 488 IPR038538 -
Acco05g1755 488 Gene3D Transcription termination factor 3, mitochondrial 54 257 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1755 Acco-ChrAcco05 33889488 33891038 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Acco05g1755 mTERF 3.6e-19 No_clan