Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1752 ATGGGCGAGGTCGTGCTGAGTACTGACAAGGTTCTGGAAGCGACTGAGTTAGAGGCCGAGAACCACCATAAGCAGAAGGCGACGGCGGAGGTGGAAGAGAGTGGAACGCAGAGTAAGGATGATGAATTGAATGGATTGATGCGGTGGAAGAATTTCTTGCCGAAAATGACATTGAGGGTATTGTTGGCTGAAGCTGATGATTCTACACGGCAGATTATTGCTGCGCTTCTCAGGAAATGCAACTACAGAGTGGCCGCTGTTGCTGATGGCTTGAAGGCATGGGAAATACTGAAGGGAAGACCACACAATGTTGATCTCATATTAACAGAAGTAGATTTGCCATCAATCTCTGGTTATAGTCTTCTCACATTAATAACGGAGCATGAAGTTTGCAAGAACATTCCTGTTATAATGATGTCTTCGCAGGATTCAATCAACACAGTCTACAAATGCATGCTGAGAGGTGCAGCTGACTACCTTGTTAAGCCCCTTAGAAAAAACGAGCTGAGGAATTTGTGGCAGCATGTTTGGAGAAGACAATCTTCAACCTCTGGTGTTAATGGTCTTGAAGACGAGAGTGTTGCACAACTGAAGGCTGAAGCCACTGCCGAAAACAATGCTCCAGATAATCATTCAAGTGGCAATGCTGCATGCATTCAAAGAAATAAGGAATTAATTGAGAAAGGAAGTGATGCTCAGAGCTCCTGTGGTGCAAAACCTGATTTGGAAGCTGAGAGTGCTCCGGCAGATCATGAGTATGAATCTTCCCAACTAAAGCATGTTGAACCATACCCAAGAGAAACAAAGATGCAGGAGGTAGAAATGTCCATTCAAGTGGGCCAGACCTTGACTGTGCATGACAATCACCCCGGAGGATTAACAGTTGAGATCCGAAAAATTGGTGGTGAGAATAATTCAGCATACGGCAAGGATGGTGACAAAGAATATTTTAGGAATCCTGACGCCAGTCGGGAGGCTTATGACAACCACAATGTTCAAATTACCTCTTCAAAGGAAGCTATCGACTTGATTGGAGCATTTCAAAATCATCCAAACATCTGTCACAGAAGTTCCTCAGTCAACTGCACGGGCACATTTGACTTTTCTCCTCAGCTGGATCTTTCCTTGAGAAGATCTCATCCCAGCAGATTTGAGAATGAAACTACTAAAGAAACGCATGCCCTGATGCATTCTAGTGGCTCCGCTTTCAGGCGGTATACTAATAGGCAAACACAAGCACCGCCTACAGAGTCCGTAAACTGCTGCAATCAACCAAGAGAAAAGAGAACAAATTGTGAGAACAAAATCTCAAACGTTGTTGGCTATAATTCAGACATTTCAATGCCTAATTTGCAAGGAAGTATTGTGTCTTCAGCTGCACCGGAGTCGAAAGAATCTGAGCTCACAACTTCACCCTCCCAGTGTAGACTTTCACATCCAATCCCAGTAAAAGCTGTAAGGTACGATAATCCATGCACAGCCTATGGTTCTGCATTTCCTCCTATGTTCCGTACGCAGTCAGACCCCGCATCAACAACACTAAATCCAGACTCAATTCCACACCATGAACCAACCTTTCAAGAGAATGGTTTTTATCAGTCAAATACCAGAGAAAGCAGTTCAGAGCAGCTTTATGAACCTCAAGCTCAAAATGGAAACAACACAAAAAACCACATTGTGTACATGCAGGAAGGCAATTTAGAAGATGTGGAGGATCGAAGAAGACACATATCTCTCACGACCGGTCTAAGTGCCTGCACTAACAGCAATACTGACCAGGGTGCTATAGCCAGGGCAACTTCCGAGAGCATGACTGAAGACCTCACAATTAATACAAGTTCTCATCGATCTATGCTAAGAGAAGCAGCTCTAAACAAATTCCGCTTGAAACGGAAAGAGAGATGCTTTGAAAAGAAGGTTCGGTATGAAAGCAGAAAGAAACTTGCAGAGCAGCGTCCTAGAGTGAAGGGACAATTTGTTCGTCAAGTGCAGCAAGATTCCTAG 2004 0.4411 MGEVVLSTDKVLEATELEAENHHKQKATAEVEESGTQSKDDELNGLMRWKNFLPKMTLRVLLAEADDSTRQIIAALLRKCNYRVAAVADGLKAWEILKGRPHNVDLILTEVDLPSISGYSLLTLITEHEVCKNIPVIMMSSQDSINTVYKCMLRGAADYLVKPLRKNELRNLWQHVWRRQSSTSGVNGLEDESVAQLKAEATAENNAPDNHSSGNAACIQRNKELIEKGSDAQSSCGAKPDLEAESAPADHEYESSQLKHVEPYPRETKMQEVEMSIQVGQTLTVHDNHPGGLTVEIRKIGGENNSAYGKDGDKEYFRNPDASREAYDNHNVQITSSKEAIDLIGAFQNHPNICHRSSSVNCTGTFDFSPQLDLSLRRSHPSRFENETTKETHALMHSSGSAFRRYTNRQTQAPPTESVNCCNQPREKRTNCENKISNVVGYNSDISMPNLQGSIVSSAAPESKESELTTSPSQCRLSHPIPVKAVRYDNPCTAYGSAFPPMFRTQSDPASTTLNPDSIPHHEPTFQENGFYQSNTRESSSEQLYEPQAQNGNNTKNHIVYMQEGNLEDVEDRRRHISLTTGLSACTNSNTDQGAIARATSESMTEDLTINTSSHRSMLREAALNKFRLKRKERCFEKKVRYESRKKLAEQRPRVKGQFVRQVQQDS 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1752 667 MobiDBLite consensus disorder prediction 504 555 - -
Acco05g1752 667 SUPERFAMILY CheY-like 51 184 IPR011006 -
Acco05g1752 667 SMART REC_2 58 173 IPR001789 GO:0000160
Acco05g1752 667 ProSiteProfiles CCT domain profile. 620 662 IPR010402 GO:0005515
Acco05g1752 667 MobiDBLite consensus disorder prediction 20 40 - -
Acco05g1752 667 Coils Coil 12 32 - -
Acco05g1752 667 MobiDBLite consensus disorder prediction 456 475 - -
Acco05g1752 667 MobiDBLite consensus disorder prediction 229 263 - -
Acco05g1752 667 PANTHER TWO-COMPONENT RESPONSE REGULATOR 58 272 IPR045279 GO:0009736
Acco05g1752 667 MobiDBLite consensus disorder prediction 646 667 - -
Acco05g1752 667 MobiDBLite consensus disorder prediction 244 263 - -
Acco05g1752 667 ProSiteProfiles Response regulatory domain profile. 59 177 IPR001789 GO:0000160
Acco05g1752 667 CDD psREC_PRR 60 163 - -
Acco05g1752 667 Pfam CCT motif 620 662 IPR010402 GO:0005515
Acco05g1752 667 Gene3D - 56 273 - -
Acco05g1752 667 MobiDBLite consensus disorder prediction 503 555 - -
Acco05g1752 667 Pfam Response regulator receiver domain 60 171 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1752 Acco-ChrAcco05 33858639 33862629 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1752 339 664 Response Regulator Gene Family AT5G24470 32.335 3.72e-29 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Acco05g1752 Response_reg 6.2e-21 CL0304