Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1734 ATGGGTGCGGCTAATAACTGTAATCCGCCGCCGCAGCCGCCTAGTGGGGATGAGACGGCGGTTTTACCTCTGAATTCGCTGCCTTTGGGTTTCAGATTTCGGCCCACCGACGAGGAGCTTGTTGATTATTACCTGAGACAGAAGATTAACGGTTTTGGCCACGACGTCTGGGTTATTCGGGAAATCGATGTTTGCAAATGGGAGCCCTGGGATTTGCCTGATTTATCGGTGATACGGAACAAGGATCCAGAGTGGTTCTTCTTTTGTCCTCAGGATCGCAAGTACCCGAATGGCCATAGATTGAACCGAGCAACAAATCAAGGGTATTGGAAAGCAACTGGCAAGGATCGCAAAATTAAGTCTGGTTCTAACTTGATAGGAATGAAGAAGACTTTAGTCTTCTATAGTGGTCGTGCTCCCAGGGGGAAGAGGACCTATTGGGTTATGCATGAGTACCGTCCTACTCTTAAGGAGCTTGATGGTACCAATCCTGGACAGAATGCCTATGTCCTCTGCCGTTTGTTTAAGAAACAAGATGAAACTCTTGAAGCTGATGAAACAGAACGGACCGCGTCAACTCCTACTGCTGCTAATTACTCCCCAGAAGAAATACAGTCTGATGCAGGTATGGCTGTGGTATCCCCATCTGTGGTATCCCCATCGCCAGCTCCAGAAGATGATAAGCGGCAGATAGTTCCATTCTGTATTTCTGAGAACACTGAAGAAACCACATCTAACGTAATAACATCAGCTGATTGCCATAGTGATGGGGGTGATGCTTCCTACGCACAAAATCAAAATGCAGATAAAACAGCTTTGGAGGAGGATCCATTGGAAAGCCTTGGTGATATATTTAATCAACCAATAACTGGGCCGTTTGATGACAAGATGTTCTCCCCATTACATATGTCGGAATTTTATGATCGAGTGTGCAATGAGTCAGATGGTCAATGTGGGCTGCAACTTCCATATGGCACTAATGAGACAAATATTTCCGACTTCTTAGACCCATACATTAATTGTGAAGAATTTTCCTGCGAGGACGACATGAGTCAGAAGCCACCCTCTGGCATTTTAAATCATTGGGACAATGGATCTGGCAATGTCTCAGATGAGAAAATGGCCAATATACGGTATTGGCAAGCGTTGCTTGCTGCGCATCCTGAGGAGCAAATTGACAACAGGGTTCCTTCCATGATAGATACAGCTTCAGAATTTAACAGAAACATTACCTCTGACCTCGGCGGTTATGAGCAGAAGAGCAATATGGGGATATTCCAATGCCATCCTCAGATGGCTTTGCCATCTAATGTTGCTTTTGACCCAATCTTTGGTGTATTAAATGGTGGTCAAGAACCAAGTAACTACAATACAGTTGTTGGCAGTGATAATGGTACCGGGATCAGGATTAGGACTCGCCCAGTGCGAAATGAACAGGTAAACACGTACCCTATGAACCAAGGACAAGGTACTGCTCCAAGAAGAATACGTCTACACGGAGACGTATTTCCAACTAGCTCCAATAAAGTTGCGAAAGATGGGAGATGTGCTCAAGATGACCATGACTCAAAACCAGTTATCCCAGGGGAGACTATAGCCTCAGAAAACGATGCTGCTGAAGAGGATGATACTAATACTGAGGCTGAGAGTGAGCCTTCGACTCCCGAGTCAGTTGACAGTAACAAGATTTCTCAACCACTTGTTACAAATGAAGATTCTCTCTCTGGTTTAGAAGAGACCTTGTTGTGCAAATCAGCTTCTTCTCGTGGGGCGACAATCTGGTCATCTAAAGTGGTACTCTCTGTCAGCATAATGGCCGCAGTAGTATTCATGGCTAACATATGGGGAATTCTTAAATTTTGA 1863 0.4498 MGAANNCNPPPQPPSGDETAVLPLNSLPLGFRFRPTDEELVDYYLRQKINGFGHDVWVIREIDVCKWEPWDLPDLSVIRNKDPEWFFFCPQDRKYPNGHRLNRATNQGYWKATGKDRKIKSGSNLIGMKKTLVFYSGRAPRGKRTYWVMHEYRPTLKELDGTNPGQNAYVLCRLFKKQDETLEADETERTASTPTAANYSPEEIQSDAGMAVVSPSVVSPSPAPEDDKRQIVPFCISENTEETTSNVITSADCHSDGGDASYAQNQNADKTALEEDPLESLGDIFNQPITGPFDDKMFSPLHMSEFYDRVCNESDGQCGLQLPYGTNETNISDFLDPYINCEEFSCEDDMSQKPPSGILNHWDNGSGNVSDEKMANIRYWQALLAAHPEEQIDNRVPSMIDTASEFNRNITSDLGGYEQKSNMGIFQCHPQMALPSNVAFDPIFGVLNGGQEPSNYNTVVGSDNGTGIRIRTRPVRNEQVNTYPMNQGQGTAPRRIRLHGDVFPTSSNKVAKDGRCAQDDHDSKPVIPGETIASENDAAEEDDTNTEAESEPSTPESVDSNKISQPLVTNEDSLSGLEETLLCKSASSRGATIWSSKVVLSVSIMAAVVFMANIWGILKF 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1734 620 MobiDBLite consensus disorder prediction 550 570 - -
Acco05g1734 620 MobiDBLite consensus disorder prediction 502 570 - -
Acco05g1734 620 Pfam No apical meristem (NAM) protein 28 153 IPR003441 GO:0003677|GO:0006355
Acco05g1734 620 Gene3D NAC domain 36 182 IPR036093 GO:0003677|GO:0006355
Acco05g1734 620 ProSiteProfiles NAC domain profile. 27 177 IPR003441 GO:0003677|GO:0006355
Acco05g1734 620 MobiDBLite consensus disorder prediction 535 549 - -
Acco05g1734 620 SUPERFAMILY NAC domain 21 177 IPR036093 GO:0003677|GO:0006355
Acco05g1734 620 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 26 241 - -
Acco05g1734 620 FunFam Nac domain-containing protein 86 36 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1734 Acco-ChrAcco05 33689480 33692480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1734 20 499 NAC Transcription Factor Family AT4G35580 41.770 6.13e-98 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco05g1734 NAM 9.9e-35 No_clan