Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1722 ATGTCGAACAGATTTTTGAGGATGGTGGATAGAGAAAAAGATGGGTTTGAGGAAGAAGAAGATGAGCAATTGAAGAGTAAGAGAGAAGTGAAAAGCTTGTCGTTCTTTACACTGTTGAGTTATGCTGATGCAGTGGATTGGATTCTGATGGCGTTGGGGACTGTGGGTTCTGTGGTGCATGGCATGGCTTTCCCTGTAGGCTATCTCTTGCTTGGAAAAGCTCTTAATGCTTTTGGCACCAATATCAATGACAGTGACGCCATGGCTAGAGCTCTTAAAGAAAAGGTAGTTCCCTATGTGTGGTACATGGCCATCGCCACATTTCCTGCTGGAATACTGGAGACGGGGTGCTGGATGTACACAAGTGAAAGACAAGTAGCAAGGCTAAGATTAGCATACTTAAGAGCAGTACTAAGCCAAGAGATTGGAGCGTTTGACACCGAATTAACAAGTGGCAAAATCATCAACGGAATCAGCAATCACATGAGTATCATCCAAGATGCCATTGGAGAGAAGTTGGGCCACTTCACAGCATGCCTCGCAACTTTCTTCTCTGGACTTGTGATTGCTGCATATTGCACCTGGGAAATTGCACTTCTGTGTCTAGTAGTTGTCCCTCTTATTCTTCTTATAGGGGCCACTTACACCAAGAGGATGAACAAAATTTCGACCACCAAAATGATTCACCAGACTGAAGCCACAGCTATGATTGAACAGACAATATCACAAATAAAAACTGTATATGCATTTGTTGGGGAGAGCTCTGCAATGAAAGCCTTCACAGAAAACATGGACAAGCTTTATATTATAAGCAAAGGAGAGGCACTTGTAAAGGGAGTTGGAACAGGAATGTTCCAAACTGTGAGTTTTGTTTCATGGGCTCTCATTGTTTGGGTTGGAGCTGTTGTGGTCACTGCTCATAGAGCAACTGGAGGAGACATTATTGCTGCTGTCATGAGCATTCTCTTTGGTGCTATATATTTGACTTACGCTGCACCAGACATGCAAATATTCAATCAGGCAAAAGCAGCAGGATATGAGGTTTTCCAAGTGATCCAAAGAAAACCACTCATAAGTAACGAATCAGAAGGAAAGAAACCTCAGAAGATTGAAGGCTGCATCGAAATACGCGATGTTCACTTTTCATATCCATCACGCCCAAAGAAACCGATCCTTCAAGGATTTTCGCTGTCAATACCTGCAGGGAAGTCAGTAGCATTAGTTGGTAGTAGTGGATGTGGAAAGAGTACTGTCATCTCCCTAGTTTCCAGATTTTATGAAGCCTCAAAAGGAGAAATTTTCATTGATGACCATAATATTAATGATCTTGATTTGAAGTTCCTTAGAAGAAACATAGGAGCTGTTTCCCAAGAACCTTCACTTTTCACAGGCACCATCAAGGATAATTTGAAAGTGGGGAAAATGGAAGCAGATGATCAAGAGATACAGAGTGCAGCAGAAATGTCAAATGCGCACTCTTTCATATCAAAACTTCCAGATCAGTACCTAACAGAGGTAGGACAAAGGGGTGTCCAATTATCAGGAGGCCAAAAACAAAGGATAGCAATCGCAAGGGCCATTCTAAAAAATCCACCAATTCTGTTGCTTGATGAAGCTACAAGTGCCCTAGACTCAGAATCAGAGAAGCTGGTTCAAGAGGCTCTTGAGAAAGCCATGAGTGGAAGAACTGTGATCATGATTGCTCACAGGTTATCAACTGTAGTAAATGCAGACATAATTGTTGTTGTGCAGAATGGACAAGTATCAGAAATAGGAACACACAACAGTTTGCTAGAAACTAGCCAATTTTATAACGCACTTTACAACATGCAGAACCTTGAACCACACCCTGAATCTAGGCCATCAAGTTCAAAGGATGAAACTTTAAGTGTCATAAAGGAAGATTCTTTTCGAGAAATTATATCACAGGAGAAGCAAATTGATAATATGCTAGAAATTCTCATCCAGAATTCGATGGAAGAGGAACAGAATAGCAGAAAACAAACAAGTAAATTTTTCAGAATCTGGTATGGTCTAAGAAAAAGAGAGCTTGCAAAGACAGCCATTGGAGCCTTCGCAGCAGCTTTTTCCGGCATCTCAAAGCCGGTTTTTGGATTCTACATCATCACCATTGGAGTAGCATACTTTGGTCACGATGCAAAAAAGAAAGTCGCATTGTATTCTCTCATCTTCGCGGCAATAGGGTTACTTTCACTATTCAGTCACACCTTGCAACATTACTACTTTGGAATAATTGGAGAAAAGGCCATGGGAAATATCAGACGAGCTCTTTATTCAGGAGTACTTCGTAACGAAATTGGCTGGTTTGACATACCTGAGAACAGTGTTGGTTCACTAACTTCGCGCATTATAAGCGACACGGCCATGGTCAAAGTCATAATTGCTGATCGCATGTCTGTAATTGTCCAATGCATTTCCTCTGTACTAATAGCAACAGTGGTGAGCATGTATGTTAACTGGAGAATGGGTTTAGTAGCTTGGGCTGTAATGCCCTGCCACTTCATAGGTGGTCTTGTTCAAGCCAAGGCTGCTAAAGGATTCTCAGGAGACAGCTCAGCTGCACATTCTGAACTCGTTGCTCTTACATCGGAGTCCACGACAAACATTAGGACTGTCGCATCGTTTTGCCATGAAGAACATGTGTTGAGGAAAGCCAAAGCATCCTTGGACATCCCGAAGAAGAAGTACAGAAATGAAAGCATCAAATATGGTATCATTCAAGGCTTCTCTATATTCTTATGGAATGTTGCACACGCTGTAGCTTTATGGTACACAGCAATTCTAGTCGAAAGACGGCAAGCTTCGTTTGAAAATGGCATAAGATCGTATCAGATTTTTTCTCTCACTGTCCCTTCCATCACAGAGCTGTACACATTGATCCCTACTGTGATCTCTGCTATTAGTATACTTACACCAGCATTCCAAACCCTTGATCGGAAAACTGAGATTGAACCAGATGTCCCAGAAGACGTAGAGCCAAAGCCAATACAAGGAAATATTGAATTTGAAGGAGTAAAGTTCAACTATCCGTTGAGACCTGAGGTGACTGTTCTTGACAATTTCAGTTTGAAAATTAAAGCTGGTTCAAAAGTGGCTTTTGTGGGGCCAAGTGGGGCTGGGAAATCATCTGTATTGGCCCTTTTACTCAGATTTTATGATCCAAGAGAGGGACAGGTACTCATTGATGGGAAAGACATTAAGGATTATAACCTAAGATGGTTAAGGAAACAGATAGGGTTGGTACAACAAGAGCCAATGCTTTTTAACTGTTCTATAAGAGAGAATATTTGTTATGGCAACAATGAAGCTTCTGAAAGTGAGATAGTGGAAGTTTCTAGAGACGCAAACATACATGAATTTGTGAGTAATCTACCAAATGGGTATAACACTGTGGTTGGGGAGAAAGGATGTCAGCTTTCAGGAGGGCAAAAGCAGAGAATAGCAATCGCTAGAACATTGTTAAAGAAGCCGGCGATTTTGCTTCTTGATGAAGCAACAAGTGCTCTTGATGCCGAGTCTGAAAGAACAGTGATAAGTGCAATGAAGACAATAAGTCAAAAGGCAGGAATAGGGTTGAATTCAAGAACAACTCAGATCACAATAGCTCATAGGCTTTCCACTGTTATAAACTCAGATACCATAATTGTTATGGAGAAAGGCAAAATTGTGGAGATGGGGTCCCACTCAACCTTGATAAAGTCAGAAACAGGGCTTTACTCGAAGCTCTCCAAGTTGCAGAGTTTTGAAAAAAGCTGA 3777 0.4146 MSNRFLRMVDREKDGFEEEEDEQLKSKREVKSLSFFTLLSYADAVDWILMALGTVGSVVHGMAFPVGYLLLGKALNAFGTNINDSDAMARALKEKVVPYVWYMAIATFPAGILETGCWMYTSERQVARLRLAYLRAVLSQEIGAFDTELTSGKIINGISNHMSIIQDAIGEKLGHFTACLATFFSGLVIAAYCTWEIALLCLVVVPLILLIGATYTKRMNKISTTKMIHQTEATAMIEQTISQIKTVYAFVGESSAMKAFTENMDKLYIISKGEALVKGVGTGMFQTVSFVSWALIVWVGAVVVTAHRATGGDIIAAVMSILFGAIYLTYAAPDMQIFNQAKAAGYEVFQVIQRKPLISNESEGKKPQKIEGCIEIRDVHFSYPSRPKKPILQGFSLSIPAGKSVALVGSSGCGKSTVISLVSRFYEASKGEIFIDDHNINDLDLKFLRRNIGAVSQEPSLFTGTIKDNLKVGKMEADDQEIQSAAEMSNAHSFISKLPDQYLTEVGQRGVQLSGGQKQRIAIARAILKNPPILLLDEATSALDSESEKLVQEALEKAMSGRTVIMIAHRLSTVVNADIIVVVQNGQVSEIGTHNSLLETSQFYNALYNMQNLEPHPESRPSSSKDETLSVIKEDSFREIISQEKQIDNMLEILIQNSMEEEQNSRKQTSKFFRIWYGLRKRELAKTAIGAFAAAFSGISKPVFGFYIITIGVAYFGHDAKKKVALYSLIFAAIGLLSLFSHTLQHYYFGIIGEKAMGNIRRALYSGVLRNEIGWFDIPENSVGSLTSRIISDTAMVKVIIADRMSVIVQCISSVLIATVVSMYVNWRMGLVAWAVMPCHFIGGLVQAKAAKGFSGDSSAAHSELVALTSESTTNIRTVASFCHEEHVLRKAKASLDIPKKKYRNESIKYGIIQGFSIFLWNVAHAVALWYTAILVERRQASFENGIRSYQIFSLTVPSITELYTLIPTVISAISILTPAFQTLDRKTEIEPDVPEDVEPKPIQGNIEFEGVKFNYPLRPEVTVLDNFSLKIKAGSKVAFVGPSGAGKSSVLALLLRFYDPREGQVLIDGKDIKDYNLRWLRKQIGLVQQEPMLFNCSIRENICYGNNEASESEIVEVSRDANIHEFVSNLPNGYNTVVGEKGCQLSGGQKQRIAIARTLLKKPAILLLDEATSALDAESERTVISAMKTISQKAGIGLNSRTTQITIAHRLSTVINSDTIIVMEKGKIVEMGSHSTLIKSETGLYSKLSKLQSFEKS 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1722 1258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 688 972 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco05g1722 1258 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 51 340 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco05g1722 1258 SMART AAA_5 401 587 IPR003593 GO:0016887
Acco05g1722 1258 SMART AAA_5 1034 1228 IPR003593 GO:0016887
Acco05g1722 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 999 1253 IPR027417 -
Acco05g1722 1258 Gene3D ABC transporter type 1, transmembrane domain 37 969 IPR036640 GO:0005524|GO:0016020
Acco05g1722 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 366 611 IPR027417 -
Acco05g1722 1258 Pfam ABC transporter 1025 1174 IPR003439 GO:0005524
Acco05g1722 1258 CDD ABC_6TM_Pgp_ABCB1_D2_like 679 990 - -
Acco05g1722 1258 PANTHER ABC TRANSPORTER B FAMILY 17 610 IPR039421 -
Acco05g1722 1258 Pfam ABC transporter 392 541 IPR003439 GO:0005524
Acco05g1722 1258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 374 610 IPR003439 GO:0005524
Acco05g1722 1258 CDD ABC_MTABC3_MDL1_MDL2 374 611 - -
Acco05g1722 1258 ProSitePatterns ABC transporters family signature. 1146 1160 IPR017871 GO:0005524|GO:0016887
Acco05g1722 1258 FunFam ABC transporter B family member 4 997 1258 - -
Acco05g1722 1258 CDD ABC_MTABC3_MDL1_MDL2 1007 1253 - -
Acco05g1722 1258 Gene3D - 997 1257 IPR027417 -
Acco05g1722 1258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1007 1251 IPR003439 GO:0005524
Acco05g1722 1258 CDD ABC_6TM_Pgp_ABCB1_D1_like 50 348 - -
Acco05g1722 1258 Pfam ABC transporter transmembrane region 51 325 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco05g1722 1258 Pfam ABC transporter transmembrane region 689 951 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco05g1722 1258 Gene3D - 364 612 IPR027417 -
Acco05g1722 1258 FunFam ABC transporter B family member 4 364 618 - -
Acco05g1722 1258 ProSitePatterns ABC transporters family signature. 513 527 IPR017871 GO:0005524|GO:0016887
Acco05g1722 1258 SUPERFAMILY ABC transporter transmembrane region 672 995 IPR036640 GO:0005524|GO:0016020
Acco05g1722 1258 SUPERFAMILY ABC transporter transmembrane region 38 344 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1722 Acco-ChrAcco05 33580579 33587709 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1722 27 1255 Calmodulin-binding Proteins AT2G36910 40.985 0.0 944