Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1707 ATGGAACGAATTACCATGTGGGTGGACCTACTTTATAAACTATGTACGAGGCAGAAAACACAAAAGGCTGAAACATCAACTAATGATGATGATGTTGTGTTGGACATACCTACCAATGGTTCTTCAAGTGGACAAAAATCAGTAGTTGTTAAACAACCAGTGGTAGAAAGTGAATGGAGAATAAGGGACTTGATGAACTCTCCTGCAGTAGTGCTTAGCACAGGCAAATATGAAAGTCTTTATATGGCGAAGCACCCTTATGTGCTCTCACCACTTGCTTTCTATTCTCACCGTCAAGAGAAGCTTCTGGCCTACGAATTCCAGGAGAATGGAAGCTTATTCAAGCTTCTTCAAGGCAAGTCAAAAGGATTTGATTGGAGCAGCAGGCTAGGAATTGCAGCCATGATAGCAGAGGGATTAACCTTTATGCATCAAGAGGTTGGGGAGAAATTAGGTATTGCACATGGAAACTTGAAGTCCTCCAACATTTGGCTGAGCTCTAACTTGGAGGCTCGCATAAGCGAGTATGGTTTGATGGACATGGACGACGATCAACTGAGTTCATCATCTTCTACTAGTCCTTCTAGTTCTGAGCCACGAAATGCTTTGAAGGAAGATGTTTATGGCTTTGGAGTAATTCTTCTCGAGCTTCTCACAGGGAAGTTGGGGAACATCGACGGGATTGACTTGGCCGAGTGGGTTCAATCTGTTGTGAGGGAAGAATGGACAGGTAAGGTGTTTGACAAGGAACTGATCATATCAGACTCTTCGAATGAAGAGAGGTTGGTGAATCTGCTTCAAGTGGCTATCAAATGTGTTCATCGTTCCCCGGAAGCTAGGCCAAGTATGAATCAGGTAGCTCTCACGATCAAAACTATCAGAGAGGAAGAAGAGAAATCTTGGATCTATGAGGTTTGA 918 0.4336 MERITMWVDLLYKLCTRQKTQKAETSTNDDDVVLDIPTNGSSSGQKSVVVKQPVVESEWRIRDLMNSPAVVLSTGKYESLYMAKHPYVLSPLAFYSHRQEKLLAYEFQENGSLFKLLQGKSKGFDWSSRLGIAAMIAEGLTFMHQEVGEKLGIAHGNLKSSNIWLSSNLEARISEYGLMDMDDDQLSSSSSTSPSSSEPRNALKEDVYGFGVILLELLTGKLGNIDGIDLAEWVQSVVREEWTGKVFDKELIISDSSNEERLVNLLQVAIKCVHRSPEARPSMNQVALTIKTIREEEEKSWIYEV 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1707 305 MobiDBLite consensus disorder prediction 31 47 - -
Acco05g1707 305 Pfam Protein tyrosine and serine/threonine kinase 79 287 IPR001245 GO:0004672|GO:0006468
Acco05g1707 305 Gene3D Transferase(Phosphotransferase) domain 1 38 299 - -
Acco05g1707 305 ProSiteProfiles Protein kinase domain profile. 1 302 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1707 305 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 84 297 IPR046959 -
Acco05g1707 305 SUPERFAMILY Protein kinase-like (PK-like) 77 294 IPR011009 -
Acco05g1707 305 MobiDBLite consensus disorder prediction 26 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1707 Acco-ChrAcco05 33390961 33392443 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1707 86 294 Receptor kinase-like Gene Family AT3G08680 42.222 1.71e-45 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco05g1707 PK_Tyr_Ser-Thr 1.7e-16 CL0016