Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1706 ATGGAACGAATTCCCATGTGGGTGGCCATCCTTTCATGTATTTTCCTCATTAATGTAACGCATTGTGTGGAGGAGGAGGTCAAGAGCTCAATGATAAGCTTCCTTGCAAAACTCTCTGGCCAACAGAATTTTTCCACTTTGAATTGGAAGGCAGATTCTGATCCTTGTAAGGACCTCTGGCATGGTGTCTCCTGCGATTCTCGTAATGTATCAGTAAGAAGGATATTTCTTGACAGGTTGGATTTATATGGAACTCTTGATATTGCTATTCTCTGCAATAGTCAACCTCTGGCTAATTCTTTGATGATTCTGAGTCTTGCTGGAAACAACGTTAGTGGAGGAATAGCAGATGAGGTTGGAAACTGCAAACAGCTAACTCGGTTGTATTTAGGGGGAAATCAACTTTCTGGGGAACTTCCTTCTTCACTTGCCATGCTAAATAACCTGAAATGGCTTGACCTTTCGAACAATAAGTTTTCTGGGAACTTGCCAGGCTTGTCCAGAATCTCAGGGCTGAATGTGTTTCTAGCACAGAACAATAACCTCAGTGGGGTCATACCTGGGTTTGATTTCTCCAACCTTTATAAGTTCAATGTTTCATTTAACAATTTTAGTGGCAGAATTCCAGATGTGCATGGCGGTTTCTCTGAAGATAGCTTTCTGGGTAATCCTGAACTGTGTGCACAGCCATTGCAGAAGAACTGTCCTATTCATAATCTAGATGAGAAAACAGAAGAGTCAAATGAATCTAATGGATCAAAGGGTCATTCTAAAGATCAAATCCTGATGTATTCAGGATATGCTGTGTTGGGTCTGGTGATTATCCTTTTCGTACTTTATAAACTATGTACAAGGAAGAAAACCCAAAAGGCTGAAGCATCAAGTAAGGTAGCATCAAGTAATGATCATGATGTGCTCGACAAGCCTACCGATGGTTCTTCAAGTGGACAAAAATCAGTAATAAGCAGATCAGAGATTTCAGTAAGCTCTGAAAGTGGGATGGTTTCACAATCACTTATAGTTCTTAAACAACCAGTAGTGGTAAGTGAATTGAGACTTGAGGACTTGCTGAGAGCCCCTGCTGAAATGCTTGGCAGAGGCAAGTATGGTAGTCTTTATAAGGTGAAGCTCGACAATGGGAAGACAGTGGTTGTGAAAAGGGTCAAGGCCTTGGCCACTTCCAGCCATGACTTCAAGCTAAAAATGGAAACTTTGGGCCAAGTGAAGCACCCTAATGTGCTCTCGCCACTTGCTTTCTATTGTTCCAATCAAGAGAAGCTTCTGGTCTATGAATTCCAGGAAAATGGAAGCTTATTCAAGCTTCTTCATGGCGAGTCAAAAGGATTTGATTGGAGCAGCAGGCTAGGAATTGCTGCTACGATAGCTGATGGATTAGCTTTCATGCATCAAGAGGTTGGGGAGAAAGGTATAGCACATGGAAACTTGAAGTCCTCCAACATTTTGCTGAGCTATAACATGGAGGCTCGGATAAGCGAGTATGGGTTGATGAACATGGACGATGATCAACTGAGCTTATCTTCTGCAAGTCCTCATCGTCCTTCCGGTTCTGGGCCACCAAATGCTTTGAAGGCAGATGTGTATGGTTTTGGAGTAATTCTTCTCGAGCTACTGACAGGGAAGTTGGTACAGAACGACGGGATTGACTTGGCTGAGTGGGTTCAATCTGTTGTAAGGGAAGAATGGACGGGTGAGGTGTTTGACAAGGAACTGATATCAGACTACGCCAGTGAAGAGAGGTTGGTGAACTTGCTTCGCGTGGCAATCAAATGTGTTCATCGTTCCCCAGAAGCCAGGCCAAGTATGAATCAGGTGGCTCTCATGGTTAACACTATCAAAGAGGAAGAAGAGAGATCTTTGATCTATGAAGTTTGA 1893 0.4295 MERIPMWVAILSCIFLINVTHCVEEEVKSSMISFLAKLSGQQNFSTLNWKADSDPCKDLWHGVSCDSRNVSVRRIFLDRLDLYGTLDIAILCNSQPLANSLMILSLAGNNVSGGIADEVGNCKQLTRLYLGGNQLSGELPSSLAMLNNLKWLDLSNNKFSGNLPGLSRISGLNVFLAQNNNLSGVIPGFDFSNLYKFNVSFNNFSGRIPDVHGGFSEDSFLGNPELCAQPLQKNCPIHNLDEKTEESNESNGSKGHSKDQILMYSGYAVLGLVIILFVLYKLCTRKKTQKAEASSKVASSNDHDVLDKPTDGSSSGQKSVISRSEISVSSESGMVSQSLIVLKQPVVVSELRLEDLLRAPAEMLGRGKYGSLYKVKLDNGKTVVVKRVKALATSSHDFKLKMETLGQVKHPNVLSPLAFYCSNQEKLLVYEFQENGSLFKLLHGESKGFDWSSRLGIAATIADGLAFMHQEVGEKGIAHGNLKSSNILLSYNMEARISEYGLMNMDDDQLSLSSASPHRPSGSGPPNALKADVYGFGVILLELLTGKLVQNDGIDLAEWVQSVVREEWTGEVFDKELISDYASEERLVNLLRVAIKCVHRSPEARPSMNQVALMVNTIKEEEERSLIYEV 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1706 630 Gene3D Transferase(Phosphotransferase) domain 1 434 628 - -
Acco05g1706 630 ProSiteProfiles Protein kinase domain profile. 358 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1706 630 Gene3D Ribonuclease Inhibitor 25 190 IPR032675 -
Acco05g1706 630 SUPERFAMILY Protein kinase-like (PK-like) 361 614 IPR011009 -
Acco05g1706 630 PANTHER OS05G0588300 PROTEIN 8 620 - -
Acco05g1706 630 Pfam Leucine rich repeat 100 159 IPR001611 GO:0005515
Acco05g1706 630 Pfam Protein tyrosine and serine/threonine kinase 362 612 IPR001245 GO:0004672|GO:0006468
Acco05g1706 630 SUPERFAMILY L domain-like 49 215 - -
Acco05g1706 630 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Acco05g1706 630 Gene3D Ribonuclease Inhibitor 191 235 IPR032675 -
Acco05g1706 630 Gene3D Phosphorylase Kinase; domain 1 328 432 - -
Acco05g1706 630 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 96 186 - -
Acco05g1706 630 ProSiteProfiles Leucine-rich repeat profile. 148 170 IPR001611 GO:0005515
Acco05g1706 630 MobiDBLite consensus disorder prediction 291 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1706 Acco-ChrAcco05 33384548 33386714 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1706 37 619 Receptor kinase-like Gene Family AT1G68400 35.783 1.42e-98 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco05g1706 PK_Tyr_Ser-Thr 3.9e-26 CL0016