Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1703 ATGGGAACATCAGGGCTTGATGATGCAGATCAAAGCTCCATTTCTTCATCATCGTCTTCGGCTGGAGTTGTAAATACGACTGAACGTAACAACACTGCCAGTACTGGAATTGGAACGTGGTATGGGGTGCGGTTGCCTTCTCCACTCTCTTTTTTACTGGATTACTCTGGCCGTCTCCGCTCAAGGTCATCAGTCGGCTATTCTGAGCCTGTAATAGACGACAACGAAGCTATGGCTTATGAATTACGACATCACCGTCAAACTTCTTCCTTAGATTCTACTGCTGTAACCATTTGCAGTGGTCGCAGTGACGGCAGTTCAGGGGAAGTTGCCATACGAATTAGTGGAGCAGTTGGACGGAATCACAATGCTGGGTTGGGTTCGGTCTCTCCAGCGTCCCTAAATCAGTCTGTAAACGATGATTTGATGGTAAATAAAAGTGGAATGCCGGTTCCGGATGAGGATGCTGAGGGTAGCAGTGGGATTATGGCTAGTGAGAGAGCTCCTCTAGCGTCCCCATCATCGTCTCAGGCTAGTAATATTAGTGGGCAGGGTGATGTTGGTGCTCTGAATGGCTTGGAAAGTAACATTCGGGGTTTATCGTCTCAAGAAAGTAATGATTTTCAGCAACTTGCCAAATGGCTTGAGCAGGTTCTTCCTTTCTCGCTGTTGTTGTTGGTTTTGTTCATTCGCCAGCATTTGCAAGGTTTCTTCGTTACAATTTGGGTTTCAATTGTGATGTTCAAGTCAAATGAAATGGTTAAGACGCAGACAGCTTTAAAGGGAGATAGGAAAGTCTCGGTTCTCCTCAGTATCTCACTTGTCTTCTTGCTTCATGTGATGTGCATTTACTGGTGGTATCAAGATGATGATCTTTTATACTCACCACTCATCTTGCTTCCTCCAAAAGCAACACCTCATTTCTGGCATGCAATATTCGTCGTTCTGATTAATGACGTACTTGCACGGCAAGCAGCAATGTCTTTCAAGTGCTTGCTACTTATATATTTAAAAAATGACAGAGGTCACAGCTTCCGTCTGCAGGCTCAGATATTAACTCTGGTAGAGCACACACTGCTGCTGTACCGTACCTTGTTACCAACACCTGTTTGGTACCGATTTTTCCTAAACAGGGAATATGGAAGTCTCTTTTCATCACTGATCACAGGGTTGTACCTAACCTTTAAGCTAACATCTGCTGTTGAGAAGGTCCAACGCTTCTTTTCTGCCTTAAAAGCATTATGGGGCAAGGATATTCTCTATGGCGTTTATGCTACAAAGGAACAGGTAAATGCTGCAGGTGACCTTTGTGCTATATGCCAGGAGAAGATGTGCGGTCCTATCCTGTTGCGCTGTAAACACATTTTCTGTGAGGAGTGTGTGTCAGAATGGTTTGACAGAGAAAGAACTTGCCCACTATGTAGGGCAGTGGTGAAGGCTGGTGACATTCGGTCTTTTGGGGATGGATCAACAAGTCTGTTTTTCCAGCTATGTTAA 1497 0.4476 MGTSGLDDADQSSISSSSSSAGVVNTTERNNTASTGIGTWYGVRLPSPLSFLLDYSGRLRSRSSVGYSEPVIDDNEAMAYELRHHRQTSSLDSTAVTICSGRSDGSSGEVAIRISGAVGRNHNAGLGSVSPASLNQSVNDDLMVNKSGMPVPDEDAEGSSGIMASERAPLASPSSSQASNISGQGDVGALNGLESNIRGLSSQESNDFQQLAKWLEQVLPFSLLLLVLFIRQHLQGFFVTIWVSIVMFKSNEMVKTQTALKGDRKVSVLLSISLVFLLHVMCIYWWYQDDDLLYSPLILLPPKATPHFWHAIFVVLINDVLARQAAMSFKCLLLIYLKNDRGHSFRLQAQILTLVEHTLLLYRTLLPTPVWYRFFLNREYGSLFSSLITGLYLTFKLTSAVEKVQRFFSALKALWGKDILYGVYATKEQVNAAGDLCAICQEKMCGPILLRCKHIFCEECVSEWFDRERTCPLCRAVVKAGDIRSFGDGSTSLFFQLC 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1703 498 SUPERFAMILY RING/U-box 431 479 - -
Acco05g1703 498 PANTHER UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN 17 497 IPR044235 GO:0061630|GO:1904294
Acco05g1703 498 CDD RING-HC_RNFT1-like 435 475 - -
Acco05g1703 498 SMART ring_2 437 474 IPR001841 -
Acco05g1703 498 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 422 485 IPR013083 -
Acco05g1703 498 ProSiteProfiles Zinc finger RING-type profile. 437 475 IPR001841 -
Acco05g1703 498 MobiDBLite consensus disorder prediction 1 29 - -
Acco05g1703 498 ProSitePatterns Zinc finger RING-type signature. 452 461 IPR017907 -
Acco05g1703 498 Pfam Zinc finger, C3HC4 type (RING finger) 435 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1703 Acco-ChrAcco05 33370894 33375262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1703 47 497 C3H Transcription Factor Family AT5G01960 55.088 1.36e-169 483