Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1702 ATGTGGTGTAATCAATGGACGATTGCAAAAGAAACTAAATGTCTCATTGTATTGATAAATGTTGCAGGGCCAGCAAGGTGCTACAGGCAAATTAAAAACAAACCATACCCGAAATCACGCTTCTGCCGTGGTGTTCCTGATCCCAAGATCAGAATTTATGATGTTGGGATGAAAAAGAAAGGTGTTGATGAGTTTCCTTTCTGTGTCCATCTTGTTAGCTGGGAGAAAGAAAATGTTTCAAGTGAGGCACTGGAAGCTGCTAGGATTGCGTGCAATAAATATATGGCTAAATTCGCTGGAAAGGATGCATTCCACTTGAGGGTTAGGGTACATCCATTCCATGTTCTCAGGATTAACAAGATGCTTTCATGTGCTGGAGCTGATAGGCTCCAAACAGGGATGAGAGGTGCATTTGGAAAGCCCCAAGGAACTTGTGCTAGAGTGGCTATTGGACAGGTTCTCCTTTCTGTTCGCTGCAAGGATGCAAACAAGAATCATGCTCAGGAAGCCCTCCGTCGTGCTAAGTTCAAGTTCCCTGGCCGCCAAAAGATCATTGTCAGCAGAAAATGGGGCTTCACCAAGTTTAGCCGTGCTGACTATGTGAAACTCAAGTCAGAGGGCAGAATCATGCCAGATGGTGTAAATGCCAAGCTTCTTGGATGCCATGGACCTTTATCTAATCGTCAGCCTGGAAGAGCCTTTCTGCACGCAACTGCTTAG 720 0.4514 MWCNQWTIAKETKCLIVLINVAGPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDANKNHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYVKLKSEGRIMPDGVNAKLLGCHGPLSNRQPGRAFLHATA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1702 239 ProSitePatterns Ribosomal protein L10e signature. 127 148 IPR018255 GO:0003735|GO:0005840|GO:0006412
Acco05g1702 239 Pfam Ribosomal protein L16p/L10e 31 185 IPR016180 GO:0003735|GO:0005840|GO:0006412
Acco05g1702 239 SUPERFAMILY Ribosomal protein L16p/L10e 24 192 IPR036920 GO:0003735|GO:0005840|GO:0006412
Acco05g1702 239 NCBIfam 50S ribosomal protein L16 24 193 IPR001197 GO:0003735|GO:0005840|GO:0006412
Acco05g1702 239 CDD Ribosomal_L16_L10e 60 185 IPR016180 GO:0003735|GO:0005840|GO:0006412
Acco05g1702 239 Gene3D Ribosomal protein L10e/L16 22 236 IPR036920 GO:0003735|GO:0005840|GO:0006412
Acco05g1702 239 FunFam 60S ribosomal protein L10 21 225 - -
Acco05g1702 239 PANTHER 60S RIBOSOMAL PROTEIN L10 24 232 IPR001197 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1702 Acco-ChrAcco05 33360814 33362158 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1702 24 239 Cytoplasmic Ribosomal Protein Gene Family AT1G66580 87.037 2.48e-141 393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1702 05 33360814 33362158 Acco10g2641 10 37102676 37108263 CCT