Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1699 ATGATGTTCGAGTTTTTAATTTCTGCAATTATTTCGCTGAGCTTCTTCTTACTATTCTTCTCTGGCACAACTTTAGCTGATCTGAACTCTGATAGGCAAGCCCTCTTAGAGTTTGCTTCCAGTGTCCCACATGCCAGAACACTCAACTGGAATGATTCTCCTTCAATTTGCATCTCATGGGTGGGTGTGACTTGCAACTCAGATAAAACTAGGGTCATTGCCATTCATCTTCCAGGAATTGGTCTCAAAGGTCACATTCCAGAAAACAGCATTGGAAAACTAGATGCCCTTACAGTACTGAGTCTCCACACCAATGGCCTTAATGGGAAGCTTCCTTCAGATATACTTTCCATTCCTTCACTTGAGTATGTACACCTTCAGCAGAATAACTTGTCAGGTCCAATCCCTTCATCTGTCTCCCCTAAACTCATTGCGCTTGATCTTTCCTTCAACTCTTTCTCTGGCACTATCCCACCCACATTTGTCAATCTCAGAAGACTCACCTGGTTGTATTTTCAAAACAATTCCATCTCTGGACAAATCCCTGACTTCAACCTCCCAAAGCTCAAGTTTCTTAATTTGAGTTATAATAACTTGAATGGCTCAATCCCCAACTCCATTCAAAAATTTCCTCATAGTTCTTTCCTTGGGAACTCTCTTTTGTGTGGGCCACCTCTGAATCATTGCTCTGCAGCAATCACCCCTTCTGGATCTCCTCCATCTGCTTACCCATCAGTCACTCCAGCAAGTACCCATAGTCGAGAACCTACCAACCCAAAGAAAAGATTTGGATTGGCTTCTATACTTGCTCTGGTAATTGGGGGCTGTGTATTCCTAGCTCTCCTAGTTCTGGTAATCTATCTGTGCTGTTGTAAGAAGAAAAAGGGACCAAGTGGTGGCATACTGAAAGCAAAGGCAGCTTGTGGAGGAAAGAATGAGATTTCAAAGAGTTTTGGAAGTGGAGTACAAGAGGCTGAGAAGAACAAATTGTTCTTCTTCAGAGGCTGCTCTTATACCTTTGATCTTGAGGATCTGCTAAAGGCTTCAGCTGAAGTTCTTGGAAAGGGAAGCTATGGGACAGCTTATAAGGCTGTTTTGGAGGAGGGAACAACAGTTGTGGTCAAGAGGTTGAGGGAAGTTGTAGTGGGGAAGAAAGAATTTGAACAGCAAATGGATATTGTGGGGAGAGTAGGAAGCCACCCTAATATCATGCCTCTTCAAGCTTATTACTATTCCAAAGATGAGAAGCTTCTGGTTTGCAGCTTCATGCCAGGAGGAAGCTTATTTTCCTCATTGCATGGAAACAGGGGAGAAGTAAGAGCTCCATTAGACTGGGATGCAAGAATGAAGATCTCACTGGGAGTTGCCAAAGGAATCGCTTTCATACACTCCGAAGGGGGTCCAAAATTCACACACGGCAACATCAAGTCCACCAATGTCCTCTTAACCCAAGACCTAGATGGCTGCGTCTCCGACGTCGGATTGCCTCCGCTGATGAACACTCCGGCGACCATGTCCAGATCTAACGGCTACCGCGCGCCGGAGGTGACGGATGCCCGGAAAATCACCCACAAGTCCGATGTCTACAGCTTCGGAGTTCTCCTCCTGGAAATGCTGACTGGGAAATGTCCGATGAGGTACCCTGGTCACGACGATGTGGTGGACCTCCCGAGGTGGGTGAGATCCGTTGTCCGGGAGGAATGGACGGCGGAAGTGTTCGACGAGGAGCTATTGAGAGGACGATATGTGGAAGAGGAAATGGTTCAGATGCTTCAGATTGCACTGGCGTGCGTCGCGAAGGTGCCGGATTCGAGGCCGAGGATGGAGGAAGCTGTGAGAATGATGGAGGAAATCAGGCAGCCGGAGTTCAAGAACCGGCCATCCTCCGAGTCGGAGTCCAATTTGCAAACACCTTAG 1917 0.4684 MMFEFLISAIISLSFFLLFFSGTTLADLNSDRQALLEFASSVPHARTLNWNDSPSICISWVGVTCNSDKTRVIAIHLPGIGLKGHIPENSIGKLDALTVLSLHTNGLNGKLPSDILSIPSLEYVHLQQNNLSGPIPSSVSPKLIALDLSFNSFSGTIPPTFVNLRRLTWLYFQNNSISGQIPDFNLPKLKFLNLSYNNLNGSIPNSIQKFPHSSFLGNSLLCGPPLNHCSAAITPSGSPPSAYPSVTPASTHSREPTNPKKRFGLASILALVIGGCVFLALLVLVIYLCCCKKKKGPSGGILKAKAACGGKNEISKSFGSGVQEAEKNKLFFFRGCSYTFDLEDLLKASAEVLGKGSYGTAYKAVLEEGTTVVVKRLREVVVGKKEFEQQMDIVGRVGSHPNIMPLQAYYYSKDEKLLVCSFMPGGSLFSSLHGNRGEVRAPLDWDARMKISLGVAKGIAFIHSEGGPKFTHGNIKSTNVLLTQDLDGCVSDVGLPPLMNTPATMSRSNGYRAPEVTDARKITHKSDVYSFGVLLLEMLTGKCPMRYPGHDDVVDLPRWVRSVVREEWTAEVFDEELLRGRYVEEEMVQMLQIALACVAKVPDSRPRMEEAVRMMEEIRQPEFKNRPSSESESNLQTP 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1699 638 Pfam Leucine Rich Repeat 188 210 IPR001611 GO:0005515
Acco05g1699 638 Pfam Leucine Rich Repeat 142 164 IPR001611 GO:0005515
Acco05g1699 638 ProSiteProfiles Protein kinase domain profile. 347 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1699 638 FunFam pollen receptor-like kinase 1 315 422 - -
Acco05g1699 638 Pfam Protein kinase domain 351 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1699 638 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 423 629 - -
Acco05g1699 638 SUPERFAMILY Protein kinase-like (PK-like) 351 616 IPR011009 -
Acco05g1699 638 Gene3D Ribonuclease Inhibitor 28 184 IPR032675 -
Acco05g1699 638 ProSitePatterns Protein kinases ATP-binding region signature. 353 384 IPR017441 GO:0005524
Acco05g1699 638 FunFam Leucine-rich repeat receptor-like protein kinase 30 140 - -
Acco05g1699 638 Gene3D Ribonuclease Inhibitor 185 230 IPR032675 -
Acco05g1699 638 Gene3D Phosphorylase Kinase; domain 1 313 422 - -
Acco05g1699 638 SUPERFAMILY L domain-like 40 227 - -
Acco05g1699 638 Gene3D Transferase(Phosphotransferase) domain 1 423 636 - -
Acco05g1699 638 FunFam Leucine-rich repeat receptor-like protein kinase 141 229 - -
Acco05g1699 638 Pfam Leucine rich repeat N-terminal domain 29 66 IPR013210 -
Acco05g1699 638 MobiDBLite consensus disorder prediction 617 638 - -
Acco05g1699 638 PANTHER OS05G0588300 PROTEIN 10 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1699 Acco-ChrAcco05 33326136 33328404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1699 5 633 Receptor kinase-like Gene Family AT5G58300 59.055 0.0 736
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco05g1699 Pkinase 1.9e-33 CL0016