Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1690 ATGGCCACTGTTTCCCCAGAGAGCAGCTTGCTCTCCCCCAGCAACAGCCACAACAACAACATGGACAATGTCATCGGAGAGCTCCTCCAGGGTTACCAGTCTGCCTCCCAACTCAAGTTTCTGCTTCAGAAGCCTTTTGACTCCGATGGCCCTCTTTCTGCTCATCAACATTTGGCCATAGTTCTTAGATCTTTCACTCTCTCCCTCTCTCTTCTCACTTCTTCTTCTTCTGATATCGAGGTTGCTCAGAATCTGGTTGTTTCCGGCGAGAATGAGCCGCCGCCGCACTACATCCCCGACCCGAAGTCACCCGATGCGAGCGAGAGTGGGGGGAGATCGGCGGCGCTGGCCACCAAGAGTCGGAGAGGTTGCTACAAAAGAAGGAGGACTGAGCCAACAAGGACCATAGTCTCTTCCACTGCGGATGATAATCATGCATGGAGAAAGTACGGACAGAAGCAAATCCTGAATTCCAAATTTCCCAGGAGTTACTTGAGATGCACTCGCAAGTATGAACAAGGTTGTCGGGCGGTGAAGCAGGTGCAGCGGATCGAAGAGAATCCTGAACTGTACCAGATTACGTACATCGGAAATCACACATGTATAGATATCCTTAAGACACCCGACCTAGTGGTCACAGAATCTGGTAGTAATTGGGAATCACTCTTCCCCTCAGAATCAAAGAAGATTCCAAACGAAGTGGTAACAAAGGTCCATCCCATGAAACAGGAGCGTCATCATCATCATCATCCCAGAGAGGAGACAACGAGTGATGATTTCGCCGACAGCAGCTTGGACCCTAGTTTGTGGTCGGATCTCAAAGACCTCTCCGAGGTTGATGATATTGTGCCTGCTTTGGGGTCTGATAATAATAATAATAATGCAGATACCGTGTATTCATGTTCTGGCTCTTTGGATTTCGGGGTCGTCGGTGATTCTGTTCATTTTGGCTCCCATGAGTTCCAGTTCGATGATTGA 978 0.4908 MATVSPESSLLSPSNSHNNNMDNVIGELLQGYQSASQLKFLLQKPFDSDGPLSAHQHLAIVLRSFTLSLSLLTSSSSDIEVAQNLVVSGENEPPPHYIPDPKSPDASESGGRSAALATKSRRGCYKRRRTEPTRTIVSSTADDNHAWRKYGQKQILNSKFPRSYLRCTRKYEQGCRAVKQVQRIEENPELYQITYIGNHTCIDILKTPDLVVTESGSNWESLFPSESKKIPNEVVTKVHPMKQERHHHHHPREETTSDDFADSSLDPSLWSDLKDLSEVDDIVPALGSDNNNNNADTVYSCSGSLDFGVVGDSVHFGSHEFQFDD 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1690 325 MobiDBLite consensus disorder prediction 89 137 - -
Acco05g1690 325 Pfam WRKY DNA -binding domain 142 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g1690 325 SUPERFAMILY WRKY DNA-binding domain 138 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g1690 325 Gene3D WRKY domain 128 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco05g1690 325 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 30 246 IPR044810 GO:0003700
Acco05g1690 325 ProSiteProfiles WRKY domain profile. 136 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g1690 325 SMART WRKY_cls 141 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco05g1690 325 MobiDBLite consensus disorder prediction 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1690 Acco-ChrAcco05 33245853 33248270 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1690 24 258 WRKY Transcription Factor Family AT3G56400 37.860 9.99e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco05g1690 WRKY 3.4e-23 CL0274