Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1686 ATGGCTTCTTCTTCTTCCTCCTCTTCCTCACCAAATTGGGTCATGGAAAATAATGGAGTCATGCCCCATGTTTTAGCTGTTGATGACAACCTCATTGACCGCAAACTCGTCGAGAAGCTCCTCAAGAATTCTTCTTGCAAAGTGACAACTGCAGAAAATGGACCAATGGCATTAGAGTTGCTGGGTTTGGCAAGTGATGAAGAAAACACCTTGAAGGGAACTGGATCTAAAGTGAATATGATTATCACAGACTATTGTATGCCTGGGATGACAGGATATGAGCTACTCAAGAAAATAAAGAAATCATCAATCATGAAGGAGGTTCCAGTGGTGATCATGTCATCCGAGAACATCCCAACTAGGGTGAACAAGTGTTTGGAGGAAGGTGCTCAGATGTTCATCCAAAAGCCCCTCAAACAATCTGATGTAAAGAAGCTGACATGTCAACTGATGAATTGCAGAGGCTAG 468 0.4274 MASSSSSSSSPNWVMENNGVMPHVLAVDDNLIDRKLVEKLLKNSSCKVTTAENGPMALELLGLASDEENTLKGTGSKVNMIITDYCMPGMTGYELLKKIKKSSIMKEVPVVIMSSENIPTRVNKCLEEGAQMFIQKPLKQSDVKKLTCQLMNCRG 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1686 155 Gene3D - 20 153 - -
Acco05g1686 155 CDD REC_typeA_ARR 24 146 - -
Acco05g1686 155 Pfam Response regulator receiver domain 24 145 IPR001789 GO:0000160
Acco05g1686 155 SMART REC_2 22 147 IPR001789 GO:0000160
Acco05g1686 155 SUPERFAMILY CheY-like 21 151 IPR011006 -
Acco05g1686 155 ProSiteProfiles Response regulatory domain profile. 23 151 IPR001789 GO:0000160
Acco05g1686 155 PANTHER TWO-COMPONENT RESPONSE REGULATOR 22 150 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1686 Acco-ChrAcco05 33213088 33213974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1686 23 154 Response Regulator Gene Family AT3G56380 72.932 5.64e-65 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Acco05g1686 Response_reg 2.7e-22 CL0304