Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1675 ATGGCTCGCCTACTGCTAAGCACAAATTCAACCTCAACCCCATCAGTTAGTGGCAACAGAACAGGTGGTTTTTACGCTACTGATGCCAATTTTGACACAAACATGGTGATAATACTAGCAGCCTTGCTCTGTGCACTAATATGTGCTTTAGGGTTAAACTCAATTGTAAGATGTGCTTTGAGATGCAGCAGCAGGTTTGCTTTTGAGACACCAGATGAAGCTGCAGCTCGTGCAGCAGCAAAAGGGTTGAAGAAGAGTGTGTTGCGTCAGATCCCTTTAGTTGTATATGGTTCATCAGGTTCTACTGATATTGGAGCCACTGAGTGTCCAATTTGCCTAGGAGAATTTGTGGATGGAGAGAAAGTTAGGGTTCTTCCAAAGTGCAACCATGGATTCCATGTTAGGTGCATAGACACATGGCTTCTCTCACATTCTTCTTGCCCTACTTGCAGACAGTCTTTGCTTGAACAACATAGTGCTGCAAGCACTTCTGGTTCTGGGCATGTATAG 510 0.4451 MARLLLSTNSTSTPSVSGNRTGGFYATDANFDTNMVIILAALLCALICALGLNSIVRCALRCSSRFAFETPDEAAARAAAKGLKKSVLRQIPLVVYGSSGSTDIGATECPICLGEFVDGEKVRVLPKCNHGFHVRCIDTWLLSHSSCPTCRQSLLEQHSAASTSGSGHV 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1675 169 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 156 IPR013083 -
Acco05g1675 169 CDD RING-H2_EL5-like 108 151 - -
Acco05g1675 169 SMART ring_2 109 150 IPR001841 -
Acco05g1675 169 PANTHER RING-H2 FINGER PROTEIN ATL78 23 163 IPR044602 GO:0016567|GO:0016740
Acco05g1675 169 FunFam RING-H2 finger protein ATL72-like 74 155 - -
Acco05g1675 169 Pfam Ring finger domain 108 151 IPR001841 -
Acco05g1675 169 SMART FANCL_C_2 105 155 - -
Acco05g1675 169 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Acco05g1675 169 SUPERFAMILY RING/U-box 108 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1675 Acco-ChrAcco05 33123203 33123712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1675 1 164 C3H Transcription Factor Family AT3G10910 60.116 1.05e-62 189