Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1656 ATGGAGGGAAGGGTGAATGTGCTGATGCAAAAGTACGAGTTAGGCAGGTTGTTAGGTCAAGGAAATTTTGCAAAGGTTTACTATGCAAGGGACCTTAGAACTGGCAATAGTGTTGCCATTAAGATCATTGATAAGGAGAGGATTCTAAAAGCTGGGCTGGTTGATCAAACAAAGCGAGAAATATCGATCATGGGACTGTTTAAACATCCAAATGTACTGCAGCTTTATGAGGTATTGGCCACCAAAACCAAGATTTACTTCATCATGGAATATGCCAAAGGGGGAGAACTGTTCAACAAGCTAACTAAAGGTAGATTCCAAGAAAATTTGGCAAGGCATTACTTTCAACAATTGATCAGCGCGATAGATTTTTGCCACGGTAATGGGGTTTATCATAGGGATTTGAAGCCAGAGAATTTGCTTTTGGATGAGAATGGAAATCTCAAGGTTGCCGATTTTGGATTGAGTGCCCTTGTCGAATCTCATCGCCAAGGAATCTTACTGCACACAACTTGTGGAACTCCTTCCTATGTAGCTCCTGAAATCATAAACAAAAAAGGCTATGATGGAGCAAAAGCTGACATATGGTCGTGTGGGGTGATCTTATATGTTCTATTGGCTGGTCAATTGCCATTTCGGGATGTGAATCTTATGGAATTGTACAGGAAAATATGCAGAGCAAAGTACAGATGTCCAAAATGGTTTTCATTTGAAGCACGCAAGCTGTTGTTCAGAATCCTTGACCCTAACCCTGACACTAGAATTTCCATATTAAAAATAAGGGAAAGTTCCTGGTTCAAAAACGGATTCACTTCAAAGGTTGATAGAATGAAAACACCAGTTATAGATGTGGAGGATTCATTCAAAGCTGATCCAAGTCTTGGTCTATCTGAGAATGAAAGTGGTGCTACCTCTGAGGCTAACCAAGCATTGCTACAACCCACTAATTTGAATGCTTTTGATATAATTTCTCTATCAGCTGGCTTTGATTTGTCTGGGCTTTTTGCAAGAGACAATGAAAGGAAAGATGTGAAATTTACGTCGCTGCACTCTGCCTCGTCTATCATTTCTGCGATAGAAGATATGGCTCGCGTTGTGGGGCTGAGGATAACGAAAATAGAGGGAGGATTGCTGAGGTTGGAGAGATCTAGTGAAGGAAGAATGGAGCCTATATCCATTGATACTGAAATATTTGAGTTCACCCCATCTTTCCATTTGATTGAGATGAAGAAGTATAGTGGTGATTCCGTAGAATACCAGAAGATGTTGGAGGAGGAGATCAGACCAGCTCTTAGAGAAATTGTGTGGGCTTGGCAAGATGAACAGCAACCGCACTAG 1338 0.4111 MEGRVNVLMQKYELGRLLGQGNFAKVYYARDLRTGNSVAIKIIDKERILKAGLVDQTKREISIMGLFKHPNVLQLYEVLATKTKIYFIMEYAKGGELFNKLTKGRFQENLARHYFQQLISAIDFCHGNGVYHRDLKPENLLLDENGNLKVADFGLSALVESHRQGILLHTTCGTPSYVAPEIINKKGYDGAKADIWSCGVILYVLLAGQLPFRDVNLMELYRKICRAKYRCPKWFSFEARKLLFRILDPNPDTRISILKIRESSWFKNGFTSKVDRMKTPVIDVEDSFKADPSLGLSENESGATSEANQALLQPTNLNAFDIISLSAGFDLSGLFARDNERKDVKFTSLHSASSIISAIEDMARVVGLRITKIEGGLLRLERSSEGRMEPISIDTEIFEFTPSFHLIEMKKYSGDSVEYQKMLEEEIRPALREIVWAWQDEQQPH 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1656 445 FunFam Non-specific serine/threonine protein kinase 312 436 - -
Acco05g1656 445 ProSiteProfiles NAF domain profile. 312 336 IPR018451 GO:0007165
Acco05g1656 445 Gene3D Transferase(Phosphotransferase) domain 1 4 317 - -
Acco05g1656 445 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1656 445 CDD CIPK_C 318 432 - -
Acco05g1656 445 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Acco05g1656 445 FunFam Non-specific serine/threonine protein kinase 5 306 - -
Acco05g1656 445 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Acco05g1656 445 ProSitePatterns Protein kinases ATP-binding region signature. 18 50 IPR017441 GO:0005524
Acco05g1656 445 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 431 - -
Acco05g1656 445 Gene3D Kinase associated domain 1, KA1 318 437 - -
Acco05g1656 445 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1656 445 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1656 445 SUPERFAMILY Protein kinase-like (PK-like) 8 294 IPR011009 -
Acco05g1656 445 Pfam NAF domain 314 372 IPR004041 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1656 Acco-ChrAcco05 32927627 32928964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1656 1 442 CBL-interacting serine-threonine protein kinases AT5G58380 58.057 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Acco05g1656 Pkinase 1.5e-72 CL0016