LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco05g1656	ATGGAGGGAAGGGTGAATGTGCTGATGCAAAAGTACGAGTTAGGCAGGTTGTTAGGTCAAGGAAATTTTGCAAAGGTTTACTATGCAAGGGACCTTAGAACTGGCAATAGTGTTGCCATTAAGATCATTGATAAGGAGAGGATTCTAAAAGCTGGGCTGGTTGATCAAACAAAGCGAGAAATATCGATCATGGGACTGTTTAAACATCCAAATGTACTGCAGCTTTATGAGGTATTGGCCACCAAAACCAAGATTTACTTCATCATGGAATATGCCAAAGGGGGAGAACTGTTCAACAAGCTAACTAAAGGTAGATTCCAAGAAAATTTGGCAAGGCATTACTTTCAACAATTGATCAGCGCGATAGATTTTTGCCACGGTAATGGGGTTTATCATAGGGATTTGAAGCCAGAGAATTTGCTTTTGGATGAGAATGGAAATCTCAAGGTTGCCGATTTTGGATTGAGTGCCCTTGTCGAATCTCATCGCCAAGGAATCTTACTGCACACAACTTGTGGAACTCCTTCCTATGTAGCTCCTGAAATCATAAACAAAAAAGGCTATGATGGAGCAAAAGCTGACATATGGTCGTGTGGGGTGATCTTATATGTTCTATTGGCTGGTCAATTGCCATTTCGGGATGTGAATCTTATGGAATTGTACAGGAAAATATGCAGAGCAAAGTACAGATGTCCAAAATGGTTTTCATTTGAAGCACGCAAGCTGTTGTTCAGAATCCTTGACCCTAACCCTGACACTAGAATTTCCATATTAAAAATAAGGGAAAGTTCCTGGTTCAAAAACGGATTCACTTCAAAGGTTGATAGAATGAAAACACCAGTTATAGATGTGGAGGATTCATTCAAAGCTGATCCAAGTCTTGGTCTATCTGAGAATGAAAGTGGTGCTACCTCTGAGGCTAACCAAGCATTGCTACAACCCACTAATTTGAATGCTTTTGATATAATTTCTCTATCAGCTGGCTTTGATTTGTCTGGGCTTTTTGCAAGAGACAATGAAAGGAAAGATGTGAAATTTACGTCGCTGCACTCTGCCTCGTCTATCATTTCTGCGATAGAAGATATGGCTCGCGTTGTGGGGCTGAGGATAACGAAAATAGAGGGAGGATTGCTGAGGTTGGAGAGATCTAGTGAAGGAAGAATGGAGCCTATATCCATTGATACTGAAATATTTGAGTTCACCCCATCTTTCCATTTGATTGAGATGAAGAAGTATAGTGGTGATTCCGTAGAATACCAGAAGATGTTGGAGGAGGAGATCAGACCAGCTCTTAGAGAAATTGTGTGGGCTTGGCAAGATGAACAGCAACCGCACTAG	1338	0.4111	MEGRVNVLMQKYELGRLLGQGNFAKVYYARDLRTGNSVAIKIIDKERILKAGLVDQTKREISIMGLFKHPNVLQLYEVLATKTKIYFIMEYAKGGELFNKLTKGRFQENLARHYFQQLISAIDFCHGNGVYHRDLKPENLLLDENGNLKVADFGLSALVESHRQGILLHTTCGTPSYVAPEIINKKGYDGAKADIWSCGVILYVLLAGQLPFRDVNLMELYRKICRAKYRCPKWFSFEARKLLFRILDPNPDTRISILKIRESSWFKNGFTSKVDRMKTPVIDVEDSFKADPSLGLSENESGATSEANQALLQPTNLNAFDIISLSAGFDLSGLFARDNERKDVKFTSLHSASSIISAIEDMARVVGLRITKIEGGLLRLERSSEGRMEPISIDTEIFEFTPSFHLIEMKKYSGDSVEYQKMLEEEIRPALREIVWAWQDEQQPH	445

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco05g1656	445	FunFam	Non-specific serine/threonine protein kinase	312	436	-	-
	Acco05g1656	445	ProSiteProfiles	NAF domain profile.	312	336	IPR018451	GO:0007165
	Acco05g1656	445	Gene3D	Transferase(Phosphotransferase) domain 1	4	317	-	-
	Acco05g1656	445	ProSiteProfiles	Protein kinase domain profile.	12	266	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco05g1656	445	CDD	CIPK_C	318	432	-	-
	Acco05g1656	445	FunFam	Non-specific serine/threonine protein kinase	3	91	-	-
	Acco05g1656	445	FunFam	Non-specific serine/threonine protein kinase	5	306	-	-
	Acco05g1656	445	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	130	142	IPR008271	GO:0004672\|GO:0006468
	Acco05g1656	445	ProSitePatterns	Protein kinases ATP-binding region signature.	18	50	IPR017441	GO:0005524
	Acco05g1656	445	PANTHER	CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED	6	431	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco05g1656	Acco-ChrAcco05	32927627	32928964	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco05g1656	1	442	CBL-interacting serine-threonine protein kinases	AT5G58380	58.057	0.0	553

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CAMK_CAMKL-CHK1	Acco05g1656		Pkinase	1.5e-72	CL0016

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