Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1644 ATGGATTGCTCTGTATGCACAACAATGCCTTTAATATTAAGGCCGCCCAGGAATACCATATGTGGGTCCTGTTATGAAGGAGCCAGGAGCATTCTCAACATGATGAACAAGCTTGAATCTGACAAAACAGTGGATAATCCTAATCCCTCTCCTCCTTCACCTTCCCATAATTCGAATGTTATTATTTGTGCTGCGCAGTCTCTTTCTGCATTTAAAAGATGGTATACGCAGCAGTTAGATCAGATGAATGAACATAAACATCAAGTAGCCTTCCTTGAAAGCTTTGTTGAAGCATTCAGAGAACAAACCCACACCGATATAACTGTCACTCCTGGCAATAATGGCCCTCCAATACCTTCCCATAAAGCAGTTTTGGCGACTAGGTCAGAGGTTTTCAAGAACATGTTAGATTCGGATGAATGCAAAGCAGCACCTACTAACAACATTACGATACCCGAATTGAACTATGAAGAGCTAGAGAGTCTTCTGGAGTTTCTCTACAGAGGGAACTTGGGTCCAGAAAAATTGGGGAAGCATGTGTTTGCTTTGTCTCTAGCGGCTGATAAATATGGGATTGCTTATTTACAGAAGCAGTGCGAGCAGTTTATGCTTAATTCACTGAGCATCTCTAATGCGCTTGATGTGTTGGAGATTGCAGAAACATGTTCCAACCAGAAGTTGAAGGACACTGCTATGAAGTTCTTAGTTGAAAACATTCAGGAGATTGTTTTGTCCTCAAGATATGAAGTGTTTGTGCACAGAAGCCCTCATCTAACTGTGCAACTTTCCAGGGAATCATTCAATAACATTACGATAAAATGCTTGATGCAACTTTATACAACTAATTCTGTCCAGAGCAACAGTATCATTCCCTATCAGTACATAAAAAATACCACCACAAGGCTACCTGAATAG 915 0.4077 MDCSVCTTMPLILRPPRNTICGSCYEGARSILNMMNKLESDKTVDNPNPSPPSPSHNSNVIICAAQSLSAFKRWYTQQLDQMNEHKHQVAFLESFVEAFREQTHTDITVTPGNNGPPIPSHKAVLATRSEVFKNMLDSDECKAAPTNNITIPELNYEELESLLEFLYRGNLGPEKLGKHVFALSLAADKYGIAYLQKQCEQFMLNSLSISNALDVLEIAETCSNQKLKDTAMKFLVENIQEIVLSSRYEVFVHRSPHLTVQLSRESFNNITIKCLMQLYTTNSVQSNSIIPYQYIKNTTTRLPE 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1644 304 CDD BACK 208 245 - -
Acco05g1644 304 Pfam BTB/POZ domain 99 206 IPR000210 GO:0005515
Acco05g1644 304 SUPERFAMILY POZ domain 83 205 IPR011333 -
Acco05g1644 304 Gene3D Potassium Channel Kv1.1; Chain A 74 207 IPR011333 -
Acco05g1644 304 SMART BTB_4 105 207 IPR000210 GO:0005515
Acco05g1644 304 Gene3D - 208 277 - -
Acco05g1644 304 PANTHER BTB/POZ DOMAIN CONTAINING PROTEIN, EXPRESSED-RELATED 20 270 IPR044784 -
Acco05g1644 304 ProSiteProfiles BTB domain profile. 105 175 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1644 Acco-ChrAcco05 32821754 32823177 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Acco05g1644 BTB 3.5e-21 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1644 05 32821754 32823177 Acco05g1644 05 32821754 32823177 ECH