Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1642 ATGAAACGAGAGAGTGTGTGTCTTTTTGCATGGAAAGGGAAGATGGTGGCACGTGAGGGGAGAGAGAGAGAGGGGATGAAGAAAAGGCCCCGTGAGGGGAGTAGTCATGAGGGGGAAGACGCGAAATTAAAAAGGACGAAACCACAGAGACATGAGATACCTCAGAGCTATAAGCAGAGAGTTGAAAGGAAAAGAAAAGCAACATTATCAGAGAGAAAGTTTGAAAGGCTGGTCAAGCATAAAAAAGGAGTCATTATGGTTTCTAATAAAGACCTCAAGAAGAAGAGAGAAGCTCTGCATGAGAAGCTCCAACTCCTTCGTTCTGTCACTCACTCTCATTCTCTAGACAAAACCTCGATCATATTGGACGCAACAAAGTACATCGAGGAGCTAAAGGAAAAAGTAGAAAGACTGAATCAAGACATTGCCACTGCAGAAACTTCAAAAGACCAAAATCATTTACCTATGGTTACAGTAGAAACCCTAGAAAAGGGATTCCTGATAAATGTATATTCAGGCCAGAGTTGCCCAGGCCTGCTAGTTCCCATATTGGAGGTCTTGGAAGATATGGGTCTCAGCGTTATGGAAGCTAGGGTTTCCTGTTCCGACACTTTCCAATTTCAAGCTTTTGGAGGAGAAGAAGAAGAAGAAGGTGATAGCATGGACGCAGAAGCAGTGACACAAGCAGTGGGAAGAGCCATAAAGAATTGGAGAGAGAGTACTAGTCAACAGCCTATGGATCGCATCTCCCCCAAATTCCCTTTCTCTGTGGAAGACAGCCGTCGATCTGAGCAAAGGCGGTCGCCGTCTCGCTCCGGGGTTCGGAAACCCCCTTCTCCTCCAGTTTCTTTTGCGCTGCATCCTGCCCTCAACAATGGAGAACCCACCATCGGTCTGAGCGCCGCCGATTCTAAGAGTCTGTACCAGGCTGGAAGATCAATATGGTGA 948 0.4652 MKRESVCLFAWKGKMVAREGREREGMKKRPREGSSHEGEDAKLKRTKPQRHEIPQSYKQRVERKRKATLSERKFERLVKHKKGVIMVSNKDLKKKREALHEKLQLLRSVTHSHSLDKTSIILDATKYIEELKEKVERLNQDIATAETSKDQNHLPMVTVETLEKGFLINVYSGQSCPGLLVPILEVLEDMGLSVMEARVSCSDTFQFQAFGGEEEEEGDSMDAEAVTQAVGRAIKNWRESTSQQPMDRISPKFPFSVEDSRRSEQRRSPSRSGVRKPPSPPVSFALHPALNNGEPTIGLSAADSKSLYQAGRSIW 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1642 315 Coils Coil 89 109 - -
Acco05g1642 315 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 93 145 IPR036638 GO:0046983
Acco05g1642 315 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 49 240 - -
Acco05g1642 315 MobiDBLite consensus disorder prediction 18 68 - -
Acco05g1642 315 MobiDBLite consensus disorder prediction 254 271 - -
Acco05g1642 315 Coils Coil 121 148 - -
Acco05g1642 315 MobiDBLite consensus disorder prediction 238 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1642 Acco-ChrAcco05 32811856 32819740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1642 99 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 30.137 1.84e-11 62.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1642 05 32811856 32819740 Acco05g1642 05 32811856 32819740 CCT
Acco05g1642 05 32811856 32819740 Acco05g1642 05 32811856 32819740 ECH
Acco09g0336 09 4208390 4209922 Acco05g1642 05 32811856 32819740 ECH
Acco10g1506 10 28811414 28812676 Acco05g1642 05 32811856 32819740 ECH