Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1624 ATGGGGATGAGAAATGCAGCAGATTGGCACTATATTTTGGAGAAGAAGAGAGAGAAATGGAAGAAAAATACTGGTAAAACCCAATGGTTTCGCTGGTGGATGCCTACTTTGTGGATTCTTCTGATTTCTATTTGTGTGAAGCCAGTTTTGGTTGAAGGAGGAGATGACCGTTGGGATGGAGTGGTTGTCACAGAATCAAATTTCTTGGCACTTCAATCGTTCAAGCAAGAGCTGATTGATCCAAATGGGTTCTTTAGAAGCTGGAATGACACTGGTTTCACTACTTGTTCTGGAGGTTGGGTTGGAATCAAGTGTGCTCAGGGTCAGGTTATTGTGATCCAGCTTCCATGGAAGGGATTAAAAGGTCACATCACAGAGAGGATAGGTCAACTTGATGGCCTTCGAAAGCTTAGTCTTCATGATAACCAAATTGGTGGCTCAATCCCTTCTTCATTGGGACTACTTCCTAATCTCAGAGGTGTTCAACTATTCAACAATAAGCTAGAAGGTTCCATTCCTCCTTCATTAGGTTCTTGCCTTTTGCTTCAGTCCTTAGACCTAAGTAATAACTTACTCACTGGGAAAATCCCTGATAGCTTATTTAATTCTTCTAAGCTTTATTGGCTTAATTTGAGCTTCAATTCATTCTCTGGTTCATTACCATCTTCCCTCACTCGCTTACCATCTCTCACCTTTGTTTCTCTTCAACACAATAATCTCTCTGGTTCTATCCCAAACTCATGGGGTGGGGCTCTGAAAAATGACTTCTTTCGGCTTCAGAATTTGATCCTAGACCATAACTCATTCTCTGGAACCATTCCTGCTTCTTTTGGCAGCTTGATTGAACTTAGAGAGATTTATCTGAGTCATAATCAGCTTAGTGGAGCTATCCCAAATGAAATAGGGAGCCTTTCTAGGCTTCAAACGTTGGATTTTTCAAATAATGCCCTGAATGGAAGTTTACCTGCTAGTCTCTCTAATTTGTCATCGCTTACTGTGTTGAATGTTGAGAACAACCACATCGGCGACCAAATCCCAGAATCTCTGGGTAGATTACGTAATCTCTCTGTTCTTTGTTTGAGGGGAAATCAACTCAGTGGCCTCATTCCTGAAAGTTTTGGCAACGTTACCTCGCTTAGACAGCTTGATTTGTCACTGAATAATCTCAGTGGTGAAATCCCATCCTCCTTTGACAATTTACGTAACCTTAATTTCTTCAATGTTTCTTACAATAACCTGTCTGGTCCTGTCCCCTCTCTACTTGCCCGAAAATTTAACTCGAGCTCATTTTTGGGTAATATTCAACTATGTGGGTATGATCCTTCAATCCCATGTCCTTCTCCAGCACCATCTGAGCTTGGCTCTGCTCCATCTTCTGAAATATCAAAACCCCATCATAGTCGGAAACTACACGCCAAAGACATCATTCTCATAGTAGCAGGTACTCTCCTCGTACTCCTCGTAATAATATGTTGCGTCCTGATCTTCTTCTTGATCAGAAGAAGAGCAGCATCAAAAGCAGAGCAAAAGGCGAGCGCTGGCACTGCTGGAACCGAAAAGGGGGCCTCAGCATCAGCGGCGGCAGCTGCCGGTGCAGCAGAGGCCGGCGGCGGCAGCGGCAGCGGCGAGGCAGGAGGGAAACTAGTCCATTTTGATGGCCCCACAACCTTTACAGCCGATGATCTTTTGTGTGCAACCGCAGAGATAATGGGAAAGAGCACATACGGAACAGTGTACAAAGCCACGTTGGAGGATAGAAGTGAGGTTGCAGTCAAGAGACTAAGAGAAAAGATCACTAAAGGTCAAAGAGAATTTGAATCAGAGGTCAACATTCTCGGGAAAATTCGTCACCCAAATCTTTTGGCACTAAGAGCATATTATCTGGGACCCAAAGGTGAAAAGCTTCTGGTTTTTGATTACATGTCCAGAGGAAGTCTTGCTGCTTTCTTGCACGCTCGTGGGCCAGAAACAACCATTGATTGGCCAACAAGGATGAGAATAGCACAAGGCATGGCTCGTGGCTTGTTCTACCTTCATTCCCATGAGAACGTCATACATGGGAACCTCACATCCAGCAATGTCCTGCTGGACCAAAACACAGACGCCAAAATGGCAGATTTTGGTCTTTCTAGGTTAATGACAACCGCAGCTAGTTCTAACGTGATCGCGGCAGCCGGAGCGTTGGGCTACCGGGCGCCAGAGCTGTCGAAGCTGAAGAAAGCAAACACAAAAACTGATGTGTACAGCCTTGGTGTGATCTTGTTGGAACTCCTAACAGGGAAGTCACCAGGTGAGGCCATGAATGGTGTGGATTTGCCTCAGTGGGTTGCCTCCATTGTGAAAGAGGAATGGACGAATGAGGTTTTCGACGTGGAGCTCATGAGAGATGCTTCCACCATTGGTGATGAGTTGTTGAACACATTGAAGCTTGCTTTGCACTGTGTTGATCCTTCTCCATCAGCACGACCAGAAGTTCAGCAAGTATTGCACCAATTAGAAGAGATTAGACAAGAGAGATCAGCCAGTTCTGGGGATGATGGAGTCCCAATAAGCAGTGATTAG 2562 0.4485 MGMRNAADWHYILEKKREKWKKNTGKTQWFRWWMPTLWILLISICVKPVLVEGGDDRWDGVVVTESNFLALQSFKQELIDPNGFFRSWNDTGFTTCSGGWVGIKCAQGQVIVIQLPWKGLKGHITERIGQLDGLRKLSLHDNQIGGSIPSSLGLLPNLRGVQLFNNKLEGSIPPSLGSCLLLQSLDLSNNLLTGKIPDSLFNSSKLYWLNLSFNSFSGSLPSSLTRLPSLTFVSLQHNNLSGSIPNSWGGALKNDFFRLQNLILDHNSFSGTIPASFGSLIELREIYLSHNQLSGAIPNEIGSLSRLQTLDFSNNALNGSLPASLSNLSSLTVLNVENNHIGDQIPESLGRLRNLSVLCLRGNQLSGLIPESFGNVTSLRQLDLSLNNLSGEIPSSFDNLRNLNFFNVSYNNLSGPVPSLLARKFNSSSFLGNIQLCGYDPSIPCPSPAPSELGSAPSSEISKPHHSRKLHAKDIILIVAGTLLVLLVIICCVLIFFLIRRRAASKAEQKASAGTAGTEKGASASAAAAAGAAEAGGGSGSGEAGGKLVHFDGPTTFTADDLLCATAEIMGKSTYGTVYKATLEDRSEVAVKRLREKITKGQREFESEVNILGKIRHPNLLALRAYYLGPKGEKLLVFDYMSRGSLAAFLHARGPETTIDWPTRMRIAQGMARGLFYLHSHENVIHGNLTSSNVLLDQNTDAKMADFGLSRLMTTAASSNVIAAAGALGYRAPELSKLKKANTKTDVYSLGVILLELLTGKSPGEAMNGVDLPQWVASIVKEEWTNEVFDVELMRDASTIGDELLNTLKLALHCVDPSPSARPEVQQVLHQLEEIRQERSASSGDDGVPISSD 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1624 853 SUPERFAMILY Protein kinase-like (PK-like) 568 836 IPR011009 -
Acco05g1624 853 PRINTS Leucine-rich repeat signature 304 317 - -
Acco05g1624 853 PRINTS Leucine-rich repeat signature 182 195 - -
Acco05g1624 853 Gene3D Ribonuclease Inhibitor 220 319 IPR032675 -
Acco05g1624 853 Gene3D Ribonuclease Inhibitor 320 446 IPR032675 -
Acco05g1624 853 Gene3D Ribonuclease Inhibitor 65 219 IPR032675 -
Acco05g1624 853 CDD STKc_IRAK 570 835 - -
Acco05g1624 853 FunFam Pollen receptor-like kinase 1 641 846 - -
Acco05g1624 853 Pfam Protein tyrosine and serine/threonine kinase 567 832 IPR001245 GO:0004672|GO:0006468
Acco05g1624 853 FunFam Leucine-rich repeat receptor-like protein kinase 550 640 - -
Acco05g1624 853 ProSiteProfiles Protein kinase domain profile. 564 833 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco05g1624 853 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 253 449 - -
Acco05g1624 853 Pfam Leucine rich repeat N-terminal domain 69 105 IPR013210 -
Acco05g1624 853 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 258 835 - -
Acco05g1624 853 Pfam Leucine rich repeat 182 240 IPR001611 GO:0005515
Acco05g1624 853 Pfam Leucine rich repeat 353 413 IPR001611 GO:0005515
Acco05g1624 853 Pfam Leucine rich repeat 258 317 IPR001611 GO:0005515
Acco05g1624 853 SMART LRR_typ_2 227 250 IPR003591 -
Acco05g1624 853 SMART LRR_typ_2 376 399 IPR003591 -
Acco05g1624 853 SMART LRR_typ_2 182 203 IPR003591 -
Acco05g1624 853 SMART LRR_typ_2 304 327 IPR003591 -
Acco05g1624 853 SMART LRR_typ_2 155 179 IPR003591 -
Acco05g1624 853 SMART LRR_typ_2 328 351 IPR003591 -
Acco05g1624 853 SMART LRR_typ_2 131 154 IPR003591 -
Acco05g1624 853 SMART LRR_typ_2 352 375 IPR003591 -
Acco05g1624 853 SMART LRR_typ_2 280 303 IPR003591 -
Acco05g1624 853 Gene3D Transferase(Phosphotransferase) domain 1 642 847 - -
Acco05g1624 853 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 178 252 - -
Acco05g1624 853 Gene3D Phosphorylase Kinase; domain 1 570 641 - -
Acco05g1624 853 SUPERFAMILY L domain-like 86 440 - -
Acco05g1624 853 FunFam Leucine-rich repeat receptor-like kinase 66 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco05g1624 Acco-ChrAcco05 32649806 32652477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1624 58 836 Receptor kinase-like Gene Family AT3G51740 63.555 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco05g1624 PK_Tyr_Ser-Thr 6.1e-43 CL0016