Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco05g1616 ATGCCAAAACAAAGTCATAGCCTTCTGCCTTCGTCTTCCCGCTTAAAACCCTTACCAGGATTGCCTTGGGGCAGAGAGACAGAATCAAAGCACTCACCAGTATCACCACCCCCAAGCCGCGTATTGCTAACTATGGCTCCCAACCTTGAATGTCGGATGTACGAGACCAAGTATCCGGAAGTGGACATGGCCGTCATGATACAGGTCAAGAACATCGCTGACATGGGCGCATACGTCTCACTTCTCGAGTACAACAACATCGAGGGCATGATCTTGTTCTCCGAGCTCTCTCGCCGCCGGATTCGTAGCGTCAGCAGTCTCATCAAGGTCGGCCGCATCGAGCCCGTCATGGTTCTTAGGGTCGACAAGGAAAAGGGTTACATCGATTTGAGCAAGAGAAGGGTATCTGAGGAGGATATCCAGGCTTGTGAGGAGAGGTACAACAAGAGCAAGCTTGTTCACTCCATTATGCGTCACGTTGCTGAGACTGAAAACATCGATTTAGAGGAGCTGTATATTCACATTGGGTGGCCTCTATATCGCAAATATGTTCATGCTTTTGAGGCATTTAAAATAATTGTTACTGATCCGGATTCAGTTTTGAATTCCCTCACCCGTGAGGTCAAGGAGGTTGGCCCTGATGGGCAAGAGGTGACCAAGGTGGTTCCGGCAGTGTCGGAAGCGGTGAAGGATGCTCTAGTAAAGAATATCAGAAGACGAATGACCCCTCAGCCCTTGAAAATTAGGGCAGATATTGAAATGAAGTGTTTTCAGTTTGATGGAGTTATTCACATTAAAGAAGCAATGCGGAATGCTGAAGCTGCTGGAAATAATGATTGCCCAGTGAAGATTAAACTTGTTGCTCCCCCACTTTATGTTCTTACCACTCAGACTCTTGACAAGGAGCAAGGAATATTGGTTCTCAAGGACGCTATTGATGCCTGTAAAAAGGCCATAGAGGAACACAAGGGCAAACTAGCTGTGAAGGAGGCACCCAGAGCTGTGAGTGAACGTGATGATAAATTGCTTGCTGAACACATGGCTAAGCTACGCCAAGATAATGAGGAGATCAGTGGTGATGAAGATAGTGAAGAGGAAGAAGATACGGGAATGGGAGAAGTTGATGTGGAGGGTGCTGGAATAACAGATATAGCTTGA 1158 0.4706 MPKQSHSLLPSSSRLKPLPGLPWGRETESKHSPVSPPPSRVLLTMAPNLECRMYETKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSSLIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQACEERYNKSKLVHSIMRHVAETENIDLEELYIHIGWPLYRKYVHAFEAFKIIVTDPDSVLNSLTREVKEVGPDGQEVTKVVPAVSEAVKDALVKNIRRRMTPQPLKIRADIEMKCFQFDGVIHIKEAMRNAEAAGNNDCPVKIKLVAPPLYVLTTQTLDKEQGILVLKDAIDACKKAIEEHKGKLAVKEAPRAVSERDDKLLAEHMAKLRQDNEEISGDEDSEEEEDTGMGEVDVEGAGITDIA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco05g1616 385 Gene3D EIF_2_alpha 246 368 IPR024055 -
Acco05g1616 385 SMART S1_6 60 133 IPR022967 -
Acco05g1616 385 FunFam Eukaryotic translation initiation factor 2 subunit alpha 48 135 - -
Acco05g1616 385 Coils Coil 347 367 - -
Acco05g1616 385 ProSiteProfiles S1 domain profile. 62 133 IPR003029 GO:0003676
Acco05g1616 385 Pfam Eukaryotic translation initiation factor 2 alpha subunit 171 301 IPR011488 GO:0003723|GO:0003743
Acco05g1616 385 SUPERFAMILY eIF-2-alpha, C-terminal domain 244 360 IPR024055 -
Acco05g1616 385 Pfam S1 RNA binding domain 59 133 IPR003029 GO:0003676
Acco05g1616 385 Gene3D Translation initiation factor 2; subunit 1; domain 2 136 240 IPR024054 -
Acco05g1616 385 MobiDBLite consensus disorder prediction 1 39 - -
Acco05g1616 385 Gene3D - 47 135 IPR012340 -
Acco05g1616 385 CDD S1_IF2_alpha 59 134 IPR044126 GO:0003723
Acco05g1616 385 SUPERFAMILY Nucleic acid-binding proteins 51 133 IPR012340 -
Acco05g1616 385 MobiDBLite consensus disorder prediction 349 385 - -
Acco05g1616 385 MobiDBLite consensus disorder prediction 357 373 - -
Acco05g1616 385 FunFam Eukaryotic translation initiation factor 2 subunit 1 246 368 - -
Acco05g1616 385 SUPERFAMILY eIF2alpha middle domain-like 135 240 IPR024054 -
Acco05g1616 385 FunFam Eukaryotic translation initiation factor 2 subunit alpha 136 240 - -
Acco05g1616 385 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 45 374 IPR011488 GO:0003723|GO:0003743
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco05g1616 46 379 Eukaryotic Initiation Factors Gene Family AT5G05470 80.597 0.0 520
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco05g1616 05 32556218 32560787 Acco05g1616 05 32556218 32560787 ECH